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13_1_40cm_4_scaffold_4786

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4786_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2..1351
DNA (1350bp) protein (450aa)
cbiP; adenosylcobyric acid synthase (glutamine-hydrolyzing) (EC:6.3.5.10); K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=GWA2_Rokubacteria_73_35_curated
cbiP; adenosylcobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase id=2285123 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4786_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1424..2314
DNA (891bp) protein (297aa)
cobalamin biosynthesis protein CobD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalamin biosynthesis protein CobD id=2285125 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin biosynthesis protein CobD
13_1_40cm_4_scaffold_4786_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2373..4076
DNA (1704bp) protein (568aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=2810468 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4786_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4073..4678
DNA (606bp) protein (202aa)
Sporulation and cell division repeat protein id=2285129 bin=GWA2_Methylomirabilis_73_35 species=Xanthomonas fragariae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_4786_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4681..5211
DNA (531bp) protein (177aa)
putative bifunctional protein tilS/hprT; K15780 bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8] Tax=GWA2_Rokubacteria_73_35_curated
Putative bifunctional protein tilS/hprT id=2285131 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Hpt; hypoxanthine-guanine phosphoribosyltransferase
13_1_40cm_4_scaffold_4786_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5256..7073
DNA (1818bp) protein (606aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=2610206 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_4786_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7090..8076
DNA (987bp) protein (329aa)
folP; dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase id=3047315 bin=GWF2_Methylomirabilis_70_14 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4786_8
unknown

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comp(8195..8401)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_4786_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8890..9522
DNA (633bp) protein (211aa)
YbbR family protein id=4773678 bin=GWC2_Methylomirabilis_70_16 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
YbbR family protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_4786_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9519..10868
DNA (1350bp) protein (450aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phosphoglucosamine mutase id=4870787 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glmM; phosphoglucosamine mutase
13_1_40cm_4_scaffold_4786_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10875..11291
DNA (417bp) protein (139aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Holo-[acyl-carrier-protein] synthase id=4773676 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
holo-acyl-carrier-protein synthase
13_1_40cm_4_scaffold_4786_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11293..12027
DNA (735bp) protein (245aa)
id=4870785 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3047192 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4786_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12033..13595
DNA (1563bp) protein (521aa)
yjeF; carbohydrate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein yjeF id=4773674 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
yjeF; carbohydrate kinase
13_1_40cm_4_scaffold_4786_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13579..14016
DNA (438bp) protein (146aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein family UPF0079, ATPase id=4773673 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_4786_15
unknown

Not on your lists

comp(14041..14400)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_4_scaffold_4786_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(14446..15684)
DNA (1239bp) protein (413aa)
citrate transporter n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003619913
citrate transporter
Citrate transporter {ECO:0000313|EMBL:ABJ85302.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (s
13_1_40cm_4_scaffold_4786_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15736..17142
DNA (1407bp) protein (469aa)
Putative uncharacterized protein id=4803140 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
Displaying 17 items

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