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13_1_40cm_4_scaffold_5497

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5497_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(25..1638)
DNA (1614bp) protein (538aa)
signal transduction histidine kinase, nitrogen specific, NtrB Tax=GWA2_Rokubacteria_73_35_curated
Signal transduction histidine kinase, nitrogen specific, NtrB id=1767175 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_5497_2
unknown

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comp(1883..2080)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_5497_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2246..3679)
DNA (1434bp) protein (478aa)
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidine kinase id=1767179 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_5497_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3693..3929)
DNA (237bp) protein (79aa)
thioesterase superfamily protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thioesterase; phenylacetic acid degradation protein; ComA id=14625781 bin=bin7_NC10_sister species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_5497_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3995..5281)
DNA (1287bp) protein (429aa)
Major facilitator superfamily MFS_1 id=3763004 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator transporter Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily transporter
13_1_40cm_4_scaffold_5497_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5383..6354
DNA (972bp) protein (324aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases id=3763002 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like protein
13_1_40cm_4_scaffold_5497_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6521..7663
DNA (1143bp) protein (381aa)
cofG; FO synthase subunit 1; K11779 FO synthase [EC:2.5.1.-] Tax=GWA2_Rokubacteria_73_35_curated
FO synthase subunit 1 id=3763000 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cofG; FO synthase subunit 1
13_1_40cm_4_scaffold_5497_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7641..8906
DNA (1266bp) protein (422aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 id=3762998 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5497_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8976..9263
DNA (288bp) protein (96aa)
hupB; transcriptional dual regulator HU-beta; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Transcriptional dual regulator HU-beta id=3762996 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hupB; transcriptional dual regulator HU-beta
13_1_40cm_4_scaffold_5497_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9250..9813
DNA (564bp) protein (188aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2338861 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5497_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9815..10585
DNA (771bp) protein (257aa)
2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-phospho-L-lactate transferase (EC:2.7.1.-)
2-phospho-L-lactate transferase id=4348880 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 11 items

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