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13_1_40cm_4_scaffold_6232

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6232_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..1203
DNA (1203bp) protein (401aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=4000090 bin=GWF2_Methylomirabilis_70_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6232_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1200..2432
DNA (1233bp) protein (411aa)
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family id=14627199 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family
13_1_40cm_4_scaffold_6232_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2637..3332
DNA (696bp) protein (232aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=2875184 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lipoprotein releasing system, ATP-binding protein
13_1_40cm_4_scaffold_6232_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3560..5965
DNA (2406bp) protein (802aa)
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=14627196 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ATPase AAA
13_1_40cm_4_scaffold_6232_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5995..8262
DNA (2268bp) protein (756aa)
Surface antigen (D15) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Outer membrane protein assembly factor BamA id=4879947 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Surface antigen (D15)
13_1_40cm_4_scaffold_6232_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8273..8818
DNA (546bp) protein (182aa)
Outer membrane chaperone Skp (OmpH) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative Outer membrane chaperone Skp (OmpH) id=3956968 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Outer membrane chaperone Skp (OmpH)
13_1_40cm_4_scaffold_6232_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9159..9839
DNA (681bp) protein (227aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] id=14627193 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.191)
13_1_40cm_4_scaffold_6232_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9839..10306
DNA (468bp) protein (156aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] id=14627192 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Displaying 8 items

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