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13_1_40cm_4_scaffold_6342

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6342_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
cobalamin B12-binding/Radical SAM family protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_4_scaffold_6342_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(118..801)
DNA (684bp) protein (228aa)
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10)
Putative Orotate phosphoribosyltransferase (OPRT) (OPRTase) id=3366422 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_6342_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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850..1524
DNA (675bp) protein (225aa)
peptidase M22, glycoprotease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase M22, glycoprotease id=14627521 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
peptidase M22, glycoprotease
13_1_40cm_4_scaffold_6342_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1505..1999
DNA (495bp) protein (165aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rimI; ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] id=14627522 bin=bin7_NC10_sister species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
13_1_40cm_4_scaffold_6342_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2060..2875
DNA (816bp) protein (272aa)
id=3877323 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=3877323 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_6342_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3051..3509
DNA (459bp) protein (153aa)
id=3366415 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=3366415 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_6342_7
unknown

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comp(3518..3889)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_6342_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3962..4957
DNA (996bp) protein (332aa)
Lysine/arginine/ornithine transport system kinase (EC:2.7.-.-); K07588 LAO/AO transport system kinase [EC:2.7.-.-] id=14627523 bin=bin7_NC10_sister species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_6342_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4954..6939
DNA (1986bp) protein (662aa)
Iron-sulfur cluster-binding protein n=1 Tax=Sutterella sp. CAG:521 RepID=R7KNM3_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_6342_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6939..7289
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4957133 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_6342_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7286..8167
DNA (882bp) protein (294aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=GWC2_Rokubacteria_70_16_curated
Histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase id=4307405 bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 11 items

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