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13_1_40cm_4_scaffold_7469

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7469_1
unknown

Not on your lists

comp(2..370)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_4_scaffold_7469_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1058..1600
DNA (543bp) protein (181aa)
inner-membrane translocator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator id=14625790 bin=bin7_NC10_sister species=Uliginosibacterium gangwonense genus=Uliginosibacterium taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
13_1_40cm_4_scaffold_7469_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1597..2727
DNA (1131bp) protein (377aa)
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein id=14625791 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
livM; branched chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_7469_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2731..3504
DNA (774bp) protein (258aa)
urea ABC transporter ATPase UrtD id=14625792 bin=bin7_NC10_sister species=Cycloclasticus sp. PY97M genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
urea ABC transporter ATPase UrtD Tax=CSP1_6_Rokubacteria
urea ABC transporter ATP-binding protein UrtD
13_1_40cm_4_scaffold_7469_5
unknown

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comp(3533..3697)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_7469_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4299..4568
DNA (270bp) protein (90aa)
ureA; urease subunit gamma (EC:3.5.1.5); K01430 urease subunit gamma [EC:3.5.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
urease subunit gamma (EC:3.5.1.5); K01430 urease subunit gamma [EC:3.5.1.5] id=14625794 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ureA; urease gamma subunit UreA (EC:3.5.1.5)
13_1_40cm_4_scaffold_7469_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4579..5118
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRE0_ROSCS
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABU60136.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
13_1_40cm_4_scaffold_7469_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5105..5458
DNA (354bp) protein (118aa)
urease subunit beta (EC:3.5.1.5); K01429 urease subunit beta [EC:3.5.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
urease subunit beta (EC:3.5.1.5)
Urease subunit beta id=3784203 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_7469_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5455..7173
DNA (1719bp) protein (573aa)
urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] id=14625796 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
urease subunit alpha
13_1_40cm_4_scaffold_7469_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7257..7703
DNA (447bp) protein (149aa)
ureE; urease accessory protein ureE; K03187 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
Urease accessory protein ureE id=2317449 bin=GWA2_Methylomirabilis_73_35 species=Deinococcus gobiensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureE; urease accessory protein ureE
13_1_40cm_4_scaffold_7469_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7693..8385
DNA (693bp) protein (231aa)
Urease accessory protein UreF id=2317448 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Urease accessory protein UreF; K03188 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
Urease accessory protein UreF
13_1_40cm_4_scaffold_7469_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8711..8983
DNA (273bp) protein (91aa)
ureG; urease accessory protein UreG; K03189 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
Urease accessory protein UreG id=2317447 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureG; urease accessory protein UreG
13_1_40cm_4_scaffold_7469_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8928..9812
DNA (885bp) protein (295aa)
ureD; urease accessory protein ureD; K03190 urease accessory protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Urease accessory protein UreD id=2317446 bin=GWA2_Methylomirabilis_73_35 species=Gordonia neofelifaecis genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
urease accessory protein ureD
13_1_40cm_4_scaffold_7469_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9832..10449
DNA (618bp) protein (206aa)
Putative phosphate transport regulator id=2317445 bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transport regulator; K07220 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
phosphate transport regulator
13_1_40cm_4_scaffold_7469_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10469..11461
DNA (993bp) protein (331aa)
Phosphate/sulphate permease id=2317444 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=GWA2_Rokubacteria_73_35_curated
putative low-affinity phosphate transport protein
13_1_40cm_4_scaffold_7469_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11682..12500
DNA (819bp) protein (273aa)
Methyltransferase type 11 id=4476340 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsM; arsenite S-adenosylmethyltransferase Tax=GWA2_Rokubacteria_70_23_curated
arsM; arsenite S-adenosylmethyltransferase
13_1_40cm_4_scaffold_7469_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12618..13379
DNA (762bp) protein (254aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4554898 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_7469_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13396..14424
DNA (1029bp) protein (343aa)
hypothetical protein; K06966 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Possible lysine decarboxylase family id=4476360 bin=GWF2_Methylomirabilis_70_14 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_7469_19
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

14736..16463
DNA (1728bp) protein (576aa)
NAD+ synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
nadE; glutamine-dependent NAD+ synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=14625812 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
NAD+ synthetase (EC:6.3.5.1)
Displaying 19 items

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