ggKbase home page

13_1_40cm_4_scaffold_9291

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_9291_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..2116
DNA (2115bp) protein (705aa)
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) id=14627332 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rpoB; RNA polymerase subunit beta (EC:2.7.7.6)
13_1_40cm_4_scaffold_9291_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2149..6336
DNA (4188bp) protein (1396aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) id=14627331 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
13_1_40cm_4_scaffold_9291_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


6420..6803
DNA (384bp) protein (128aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S12 id=3836486 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsL; 30S ribosomal protein S12
13_1_40cm_4_scaffold_9291_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


6807..7274
DNA (468bp) protein (156aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=14627329 bin=bin7_NC10_sister species=Photobacterium profundum genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rpsG; 30S ribosomal protein S7
13_1_40cm_4_scaffold_9291_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7369..9480
DNA (2112bp) protein (704aa)
fusA-3; elongation factor G; K02355 elongation factor G Tax=GWA2_Rokubacteria_73_35_curated
Elongation factor G id=1776811 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fusA-3; translation elongation factor G
13_1_40cm_4_scaffold_9291_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9505..9603
DNA (99bp) protein (33aa)
translation elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=GWA2_Rokubacteria_73_35_curated
tuf; elongation factor Tu id=14625952 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
tuf; elongation factor Tu
Displaying 6 items

View Taxonomy