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13_1_40cm_4_scaffold_715_8

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 7218..7850

Top 3 Functional Annotations

Value Algorithm Source
sigW1; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 175.0
  • Bit_score: 257
  • Evalue 1.30e-65
ECF subfamily RNA polymerase sigma factor id=4878370 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 174.0
  • Bit_score: 257
  • Evalue 1.60e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 181.0
  • Bit_score: 155
  • Evalue 1.40e-35

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGGCCGGACCGATCCACGCGACAATCGAATTTAGGTCGGTGGGGAACCCGGCGTGGGCGGTATGGTCTAACCTGATGGAGGGGAGGACCAGTGATGACTCCCACCTGGTGGACCGGCTCCGGCGGGGCGACGCGCGGGCCTTCGACGAGCTCGTGACCGCGTACCAGCACCGGGTCTTCTCGGTGGCCCTCAGGATGCTGCGCAACCGGACCGAGGCGGAGGAGGTCGCGCAGGAGGTGTTCCTACGAGTGTACCGGACCGTCGCCGCGTTCCGGGGCGACGCGAAGCTCTCGACCTGGCTCTACGCGATCGCGTCGCGTCTGTGTCTCAATCGCCTGGCGTCAAGCGACCGGCGGGTGACGCGGGAGGGCGACGAGACGCTGACGCGCCTCGCGAGCGGCGACGCCACCCCTGTCGACGAGCTGGAGCGAAGCGAGCTGGAGGCGACGCTGCACCGCGCGATCGCCGAGCTCCCAGAGGAGCGGCGGATCGTGGTCGTGCTCCGTGACCTCGAGGGCCTCTCGTACGAGGAGATCGCGGCGGCGCTCGACCTGGAGCTCGGCACGGTGAGGTCGAGACTCCACCGCGCCCGGATGGACCTCAAGGAGAAGCTGGAGCGGTTCCTGCCATGA
PROTEIN sequence
Length: 211
VAGPIHATIEFRSVGNPAWAVWSNLMEGRTSDDSHLVDRLRRGDARAFDELVTAYQHRVFSVALRMLRNRTEAEEVAQEVFLRVYRTVAAFRGDAKLSTWLYAIASRLCLNRLASSDRRVTREGDETLTRLASGDATPVDELERSELEATLHRAIAELPEERRIVVVLRDLEGLSYEEIAAALDLELGTVRSRLHRARMDLKEKLERFLP*