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13_1_40cm_4_scaffold_7777_1

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 2..247

Top 3 Functional Annotations

Value Algorithm Source
PAS modulated Fis family sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 85.0
  • Bit_score: 101
  • Evalue 7.90e-19
cetoacetate metabolism regulatory protein atoC id=2772883 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 88.0
  • Bit_score: 91
  • Evalue 5.90e-16
ntrC; nitrogen regulation protein NR(I) similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 81.0
  • Bit_score: 67
  • Evalue 1.50e-09

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 246
GTCCTCGACATGCACATGCCGCGGATGGGCGGGCTCGAGCTCCTCAAGCAGATCCGCGGACTCGGCGTCACCGTCCCGATCATCATGATCACCGGCAATCAGGACGTCCGAGCCGCGGCCCAGGCGCTCTCCGGCGGCGTCTTCGCGTATGTCCCCAAGCCGTTCGACTTCAAGCAGCTCGACCACCTCGTGGCCCTCGCCCTCGCGACCCCGCAACCCACGACAGGTGGCCAGCCCGCCTCCTGA
PROTEIN sequence
Length: 82
VLDMHMPRMGGLELLKQIRGLGVTVPIIMITGNQDVRAAAQALSGGVFAYVPKPFDFKQLDHLVALALATPQPTTGGQPAS*