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13_1_40cm_4_scaffold_7777

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7777_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..247
DNA (246bp) protein (82aa)
PAS modulated Fis family sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cetoacetate metabolism regulatory protein atoC id=2772883 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ntrC; nitrogen regulation protein NR(I)
13_1_40cm_4_scaffold_7777_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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228..1127
DNA (900bp) protein (300aa)
Spore coat polysaccharide biosynthesis protein spsK id=2772882 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
spsK; Spore coat polysaccharide biosynthesis protein spsK Tax=GWA2_Rokubacteria_73_35_curated
spsK; Spore coat polysaccharide biosynthesis protein spsK
13_1_40cm_4_scaffold_7777_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1097..1978)
DNA (882bp) protein (294aa)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23 4.1.3.-)
Putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase id=2772881 bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_7777_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1975..3066)
DNA (1092bp) protein (364aa)
Ste24 endopeptidase; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ste24 endopeptidase id=4232679 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M48
13_1_40cm_4_scaffold_7777_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3144..4052
DNA (909bp) protein (303aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=4232681 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATPase
13_1_40cm_4_scaffold_7777_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4055..5464
DNA (1410bp) protein (470aa)
hypothetical protein; K07161 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carbon monoxide dehydrogenase E protein id=3285633 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_7777_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5461..6153
DNA (693bp) protein (231aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4602163 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_7777_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6157..6270
DNA (114bp) protein (38aa)
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) id=4083984 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phoB; response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) Tax=GWC2_Rokubacteria_70_16_curated
Displaying 8 items

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