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13_1_40cm_4_scaffold_1152

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1152_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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3..743
DNA (741bp) protein (247aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NST2_GRAMM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_1152_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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692..1501
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362ADA2
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG88425.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1152_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1534..3090
DNA (1557bp) protein (519aa)
Na+/solute symporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL22_9BACT
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:AHG89738.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1152_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3053..3277
DNA (225bp) protein (75aa)
Na+/solute symporter Tax=GWC2_Gemmatimonadetes_71_10_curated
Na+/solute symporter
Na+/solute symporter id=4932572 bin=GWC2_Ignavibacteria_38_9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
13_1_40cm_4_scaffold_1152_5
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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3288..4118
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003816653
nucleotidyl transferase Tax=RBG_16_Planctomycetes_64_12_curated
nucleotidyl transferase
13_1_40cm_4_scaffold_1152_6

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4088..5401
DNA (1314bp) protein (438aa)
galK; galactokinase (EC:2.7.1.6)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z393_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKN86399.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_1152_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(5999..7996)
DNA (1998bp) protein (666aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ACB74293.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ACB74293.1};; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opituta
Beta-N-acetylhexosaminidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXS1_OPITP
13_1_40cm_4_scaffold_1152_8
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8008..8913)
DNA (906bp) protein (302aa)
DMT family permease id=4622876 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_4_scaffold_1152_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8914..10929)
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003764314
enterotoxin
Enterotoxin {ECO:0000313|EMBL:AHX14157.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
13_1_40cm_4_scaffold_1152_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11001..11324)
DNA (324bp) protein (108aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J681_ANAD2
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACL66976.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_4_scaffold_1152_11
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11328..11603)
DNA (276bp) protein (92aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFA5_ANADE
sulfur transfer protein ThiS
Molybdopterin synthase subunit MoaD {ECO:0000313|EMBL:ABC83260.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
13_1_40cm_4_scaffold_1152_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11600..12559)
DNA (960bp) protein (320aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI00037BF5C6
Homoserine kinase
13_1_40cm_4_scaffold_1152_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12556..13797)
DNA (1242bp) protein (414aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_4_scaffold_1152_14
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

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comp(13794..14672)
DNA (879bp) protein (293aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
13_1_40cm_4_scaffold_1152_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14938..16632
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GMC oxidoreductase
13_1_40cm_4_scaffold_1152_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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16758..17354
DNA (597bp) protein (199aa)
Tat pathway signal sequence domain-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH69_RHOM4
Tat pathway signal sequence domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Tat pathway signal sequence domain-containing protein
13_1_40cm_4_scaffold_1152_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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17380..18621
DNA (1242bp) protein (414aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B3_GEMAT
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
oxidoreductase domain protein
13_1_40cm_4_scaffold_1152_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18632..19552
DNA (921bp) protein (307aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase id=4924569 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
proline dehydrogenase
13_1_40cm_4_scaffold_1152_19
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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19549..20307
DNA (759bp) protein (253aa)
hypothetical protein id=24469341 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein
13_1_40cm_4_scaffold_1152_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20311..22572
DNA (2262bp) protein (754aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
dipeptidyl-peptidase IV; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] id=24399706 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9
13_1_40cm_4_scaffold_1152_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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22600..23688
DNA (1089bp) protein (363aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV8_SOLUE
Succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:AHG89159.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1152_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23685..24587)
DNA (903bp) protein (301aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGG1_ANASK
13_1_40cm_4_scaffold_1152_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24612..26009
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EC13D
glycoside hydrolase family 29 (alpha-L-fucosidase)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:AHG89157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1152_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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26418..27215
DNA (798bp) protein (266aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB3_SOLUE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG88575.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1152_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(27205..27489)
DNA (285bp) protein (95aa)
Copper homeostasis protein CutC n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDG7_9SPHI
Copper homeostasis protein cutC
Copper homeostasis protein cutC {ECO:0000313|EMBL:AHG88917.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 25 items

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