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13_1_40cm_4_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_122_trna_1
unknown

Not on your lists

786..859
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_122_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1136..3217)
DNA (2082bp) protein (694aa)
Potassium/proton antiporter RosB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQK1_9DELT
Potassium transporter {ECO:0000313|EMBL:KFA86761.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cyst
ybaL; putative transporter
13_1_40cm_4_scaffold_122_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3476..4357)
DNA (882bp) protein (294aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X1_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF21
13_1_40cm_4_scaffold_122_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4448..5086)
DNA (639bp) protein (213aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SecF protein
13_1_40cm_4_scaffold_122_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5197..5583
DNA (387bp) protein (129aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Caulobacter sp. AP07 RepID=J3ADQ4_9CAUL
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJL30381.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
beta-lactamase
13_1_40cm_4_scaffold_122_5
unknown

Not on your lists

5723..6100
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_6
unknown

Not on your lists

comp(6128..6385)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_7
unknown

Not on your lists

6758..7111
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_8
unknown

Not on your lists

comp(7119..7778)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7775..8836)
DNA (1062bp) protein (354aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_122_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8955..10340)
DNA (1386bp) protein (462aa)
hypothetical protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DT62_9BACL
protein kinase
13_1_40cm_4_scaffold_122_11
unknown

Not on your lists

comp(10337..12010)
DNA (1674bp) protein (558aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12078..13394)
DNA (1317bp) protein (439aa)
Putative conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) id=1866192 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein of unknown function DUF58
13_1_40cm_4_scaffold_122_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13391..14290)
DNA (900bp) protein (300aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATPase AAA n=1 Tax=Streptomyces acidiscabies RepID=UPI0002889B59
ATPase associated with various cellular activities AAA_3
13_1_40cm_4_scaffold_122_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15503..16129)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6L2_9SPHN
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_122_15
unknown

Not on your lists

comp(16147..16992)
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17035..18858
DNA (1824bp) protein (608aa)
Integral membrane protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JNY0_PSEST
protein of unknown function DUF95 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG89993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_122_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18950..19141)
DNA (192bp) protein (64aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_122_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19141..19425)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_122_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19570..20682)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH96_9BACT
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_122_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20960..22054
DNA (1095bp) protein (365aa)
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
Transcription termination factor Rho id=1249870 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_4_scaffold_122_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22069..22488
DNA (420bp) protein (140aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_40cm_4_scaffold_122_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22500..23582
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_122_23
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23533..24129)
DNA (597bp) protein (199aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q7C4_9DELT
thiE; thiamine-phosphate pyrophosphorylase
13_1_40cm_4_scaffold_122_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

24155..24523
DNA (369bp) protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=RBG_16_Chloroflexi_63_12_curated
Chorismate mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVT5_ROSS1
chorismate mutase
13_1_40cm_4_scaffold_122_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24520..25701
DNA (1182bp) protein (394aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_1_40cm_4_scaffold_122_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25730..26608
DNA (879bp) protein (293aa)
cation transporter n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002FE3B55
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation diffusion facilitator family transporter
13_1_40cm_4_scaffold_122_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26602..27456
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_122_28
unknown

Not on your lists

27574..27738
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_122_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

27872..30829
DNA (2958bp) protein (986aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD
formate dehydrogenase subunit alpha
Displaying items 1-30 of 42 in total

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