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13_1_40cm_4_scaffold_1309

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1309_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..1698)
DNA (1698bp) protein (566aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L1_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aerotolerance-related protein BatD
13_1_40cm_4_scaffold_1309_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1695..3371)
DNA (1677bp) protein (559aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L0_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
von Willebrand factor type A
13_1_40cm_4_scaffold_1309_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3371..4354)
DNA (984bp) protein (328aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K9_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_1309_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4351..5187)
DNA (837bp) protein (279aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1309_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5190..6131)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_1_40cm_4_scaffold_1309_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6128..7102)
DNA (975bp) protein (325aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K6_GEMAT
ATPase associated with various cellular activities AAA_3
13_1_40cm_4_scaffold_1309_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7099..8694)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344C83E
HEAT domain-containing protein
HEAT domain containing protein {ECO:0000313|EMBL:ACY16177.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Halian
13_1_40cm_4_scaffold_1309_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8699..10381)
DNA (1683bp) protein (561aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYB8_9BACT
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_1309_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10368..11114)
DNA (747bp) protein (249aa)
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K5_GEMAT
pseudouridine synthase Rsu
13_1_40cm_4_scaffold_1309_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11111..11350)
DNA (240bp) protein (80aa)
Segregation and condensation protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K4_GEMAT
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
segregation and condensation protein B
13_1_40cm_4_scaffold_1309_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11644..12390)
DNA (747bp) protein (249aa)
Segregation and condensation protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K3_GEMAT
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Gemmatimonadetes_66_8_curated
scpA; segregation and condensation protein A
13_1_40cm_4_scaffold_1309_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12387..13037)
DNA (651bp) protein (217aa)
Peptidase M50B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K2_GEMAT
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AHG90683.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1309_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


13193..13450
DNA (258bp) protein (86aa)
30S ribosomal protein S20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS20_GEMAT
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsT; 30S ribosomal protein S20
13_1_40cm_4_scaffold_1309_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13525..14310)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1309_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14303..14953)
DNA (651bp) protein (217aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YDE1_ANEAE
class II aldolase/adducin-like protein
13_1_40cm_4_scaffold_1309_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14950..16245)
DNA (1296bp) protein (432aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Dihydroorotase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J8_GEMAT
dihydroorotase multifunctional complex type
13_1_40cm_4_scaffold_1309_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16245..17213)
DNA (969bp) protein (323aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aspartate carbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PYRB_GEMAT
Aspartate carbamoyltransferase
13_1_40cm_4_scaffold_1309_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17210..17782)
DNA (573bp) protein (191aa)
Bifunctional protein PyrR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J6_GEMAT
Bifunctional protein pyrR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1309_19
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(17801..18760)
DNA (960bp) protein (320aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=uncultured prokaryote RepID=H5SKV3_9ZZZZ
D-isomer specific 2-hydroxyacid dehydrogenase protein Tax=RBG_16_Planctomycetes_43_13_curated
D-isomer specific 2-hydroxyacid dehydrogenase
13_1_40cm_4_scaffold_1309_20
unknown

Not on your lists

comp(18757..19509)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_4_scaffold_1309_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19516..20181)
DNA (666bp) protein (222aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
DNA-3-methyladenine glycosylase II id=3162215 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1309_trna_2
unknown

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comp(20157..20243)
DNA (87bp)
transferRNA
13_1_40cm_4_scaffold_1309_trna_1
unknown

Not on your lists

comp(20288..20374)
DNA (87bp)
transferRNA
13_1_40cm_4_scaffold_1309_22
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

20489..21286
DNA (798bp) protein (266aa)
Tryptophan 2,3-dioxygenase {ECO:0000255|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000255|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000255|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000255|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=T23O_HERA2
tryptophan 23-dioxygenase
13_1_40cm_4_scaffold_1309_23
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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21283..21936
DNA (654bp) protein (218aa)
Kynureninase id=1734527 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
kynureninase Tax=GWB2_Desulfobacterales_56_26_curated
kynureninase
Displaying 25 items

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