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13_1_40cm_4_scaffold_1391

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1391_1
unknown

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_4_scaffold_1391_2
unknown

Not on your lists

comp(445..729)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_1391_3
unknown

Not on your lists

comp(761..1375)
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_4_scaffold_1391_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1429..2244)
DNA (816bp) protein (272aa)
UbiA prenyltransferase; K04040 chlorophyll synthase [EC:2.5.1.62] Tax=GWC2_Gemmatimonadetes_71_10_curated
UbiA prenyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3A9_9BACT
UbiA prenyltransferase
13_1_40cm_4_scaffold_1391_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2358..3137)
DNA (780bp) protein (260aa)
putative transcriptional acitvator, Baf family; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWC2_Gemmatimonadetes_71_10_curated
pantothenate kinase n=1 Tax=Meiothermus timidus RepID=UPI000372C9F3
Bvg accessory factor
13_1_40cm_4_scaffold_1391_6
unknown

Not on your lists

comp(3145..4068)
DNA (924bp) protein (308aa)

This feature has no annotations

13_1_40cm_4_scaffold_1391_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4052..4774)
DNA (723bp) protein (241aa)
biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_16_Gemmatimo
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L6_GEMAT
biotin/acetyl-CoA-carboxylase ligase
13_1_40cm_4_scaffold_1391_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(4819..5601)
DNA (783bp) protein (261aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] id=7201504 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFOXYC12_FULL_TA06_54_24_curated
bacitracin resistance protein BacA
13_1_40cm_4_scaffold_1391_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5598..6422)
DNA (825bp) protein (275aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=DGGGP_THEGJ
ubiA; prenyltransferase UbiA-like protein
13_1_40cm_4_scaffold_1391_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6415..7542)
DNA (1128bp) protein (376aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L4_GEMAT
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
13_1_40cm_4_scaffold_1391_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7566..8543)
DNA (978bp) protein (326aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA dimethylallyltransferase
tRNA dimethylallyltransferase 2 id=4849898 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1391_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8530..10221)
DNA (1692bp) protein (564aa)
DNA mismatch repair protein MutL n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=MUTL_ANADF
DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1391_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10218..12563)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMG6_CORCM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aerotolerance-related protein BatD
13_1_40cm_4_scaffold_1391_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12560..14218)
DNA (1659bp) protein (553aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L0_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_1391_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14218..15099)
DNA (882bp) protein (294aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K9_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_1391_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15195..16034)
DNA (840bp) protein (280aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1391_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16031..16972)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_1_40cm_4_scaffold_1391_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16969..17949)
DNA (981bp) protein (327aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K6_GEMAT
ATPase associated with various cellular activities AAA_3
13_1_40cm_4_scaffold_1391_19
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17946..19550)
DNA (1605bp) protein (535aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SRY5_PLAL2
PBS lyase HEAT domain-containing protein Tax=RBG_16_Desulfobacca_58_9_curated
PBS lyase HEAT domain-containing protein repeat-containing protein
13_1_40cm_4_scaffold_1391_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19555..21210)
DNA (1656bp) protein (552aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQN5_MARHT
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_1391_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21197..21913)
DNA (717bp) protein (239aa)
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pseudouridine synthase n=1 Tax=uncultured Thermus/Deinococcus group bacterium RepID=H5SNE1_9DEIN
pseudouridine synthase Rsu
13_1_40cm_4_scaffold_1391_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21910..22458)
DNA (549bp) protein (183aa)
Segregation and condensation protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K4_GEMAT
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scpB; segregation and condensation protein B
13_1_40cm_4_scaffold_1391_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22433..22876)
DNA (444bp) protein (148aa)
Segregation and condensation protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K3_GEMAT
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Gemmatimonadetes_66_8_curated
scpA; segregation and condensation protein A
13_1_40cm_4_scaffold_1391_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23123..23785)
DNA (663bp) protein (221aa)
Peptidase M50B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K2_GEMAT
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AHG90683.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1391_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


23927..24187
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS20_GEMAT
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsT; 30S ribosomal protein S20
13_1_40cm_4_scaffold_1391_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24305..25120)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1391_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25190..27406)
DNA (2217bp) protein (739aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Dihydroorotase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J8_GEMAT
dihydroorotase multifunctional complex type
13_1_40cm_4_scaffold_1391_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27403..28062)
DNA (660bp) protein (220aa)
Bifunctional protein PyrR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J6_GEMAT
Bifunctional protein pyrR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1391_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28075..29409
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1391_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29417..31474)
DNA (2058bp) protein (686aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A786_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG89203.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 37 in total

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