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13_1_40cm_4_scaffold_1393

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1393_1
unknown

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comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_1393_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(90..2756)
DNA (2667bp) protein (889aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1393_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2790..3542)
DNA (753bp) protein (251aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_40cm_4_scaffold_1393_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3566..4021
DNA (456bp) protein (152aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1393_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4036..4458)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_1_40cm_4_scaffold_1393_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4500..4832
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
trxA; thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thioredoxin
13_1_40cm_4_scaffold_1393_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4851..5867
DNA (1017bp) protein (339aa)
alias=gwe2_scaffold_8_567 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alias=gwe2_scaffold_8_567 id=7202228 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_4_scaffold_1393_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5869..6696
DNA (828bp) protein (276aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA small subunit methyltransferase I
Ribosomal RNA small subunit methyltransferase I id=4074802 bin=GWC2_Chloroflexi_73_18 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_1393_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6693..7391
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF4159
13_1_40cm_4_scaffold_1393_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7388..10744
DNA (3357bp) protein (1119aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T5_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1393_11
unknown

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comp(10704..10982)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_1393_12
unknown

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comp(13148..13438)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_1393_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13674..14402)
DNA (729bp) protein (243aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1393_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15072..16211
DNA (1140bp) protein (380aa)
dinG; putative ATP-dependent DNA helicase (EC:3.6.1.-); K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dinG; putative ATP-dependent DNA helicase (EC:3.6.1.-)
Putative ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T8_GEMAT
13_1_40cm_4_scaffold_1393_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16275..16823
DNA (549bp) protein (183aa)
PREDICTED: ribonuclease UK114-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1964C
transposase for insertion sequence Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1393_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16894..18063
DNA (1170bp) protein (390aa)
aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I6_GEMAT
aminotransferase class I and II
13_1_40cm_4_scaffold_1393_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18116..18895
DNA (780bp) protein (260aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1393_18
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18945..19400)
DNA (456bp) protein (152aa)
Blr5909 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HT0_BRADU
hypothetical protein
CHRD domain-containing protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
13_1_40cm_4_scaffold_1393_19
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(19489..19893)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5ST52_9BACT
putative Cupredoxin
Uncharacterized protein {ECO:0000313|EMBL:BAL59338.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
13_1_40cm_4_scaffold_1393_20
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

comp(19898..20953)
DNA (1056bp) protein (352aa)
Plastocyanin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR1_KORVE
blue (type 1) copper domain protein
Tax=GWA2_RIF01_43_8_curated
13_1_40cm_4_scaffold_1393_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21006..22298)
DNA (1293bp) protein (431aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutamate--tRNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI5_9BACT
glutamyl-tRNA synthetase
13_1_40cm_4_scaffold_1393_trna_1
unknown

Not on your lists

comp(22398..22488)
DNA (91bp)
transferRNA
13_1_40cm_4_scaffold_1393_22
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22806..23609
DNA (804bp) protein (268aa)
Alr3897 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQD6_NOSS1
hypothetical protein
Alr3897 protein {ECO:0000313|EMBL:BAB75596.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
13_1_40cm_4_scaffold_1393_23

Not on your lists

23686..23928
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LG26_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQB63183.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
Displaying 24 items

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