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13_1_40cm_4_scaffold_1414

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1414_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3..461)
DNA (459bp) protein (153aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HHB3_9PROT
hydrophobic/amphiphilic exporter-1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
probable RND efflux membrane fusion protein
13_1_40cm_4_scaffold_1414_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(925..2220)
DNA (1296bp) protein (432aa)
Putative outer membrane macrolide efflux protein n=2 Tax=Myxococcus RepID=Q1D4Q0_MYXXD id=5224473 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane macrolide efflux protein Tax=RBG_16_RIF_WS3X_71_46_curated
outer membrane efflux protein
13_1_40cm_4_scaffold_1414_3
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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comp(2220..5306)
DNA (3087bp) protein (1029aa)
Cation/multidrug efflux pump n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLP3_9BACT
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Zixibacteria_53_22_curated
multidrug transporter AcrB
13_1_40cm_4_scaffold_1414_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5532..5867
DNA (336bp) protein (112aa)
Protein secretion chaperonin CsaA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQ31_9CLOT
Protein secretion chaperonin CsaA {ECO:0000313|EMBL:EOC99237.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter
export-related chaperone CsaA
13_1_40cm_4_scaffold_1414_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5853..7073)
DNA (1221bp) protein (407aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=14628995 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_40cm_4_scaffold_1414_6
unknown

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7333..9012
DNA (1680bp) protein (560aa)

This feature has no annotations

13_1_40cm_4_scaffold_1414_7
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(9200..11503)
DNA (2304bp) protein (768aa)
5'-nucleotidase id=7200421 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
5'-nucleotidase Tax=RIFOXYC12_FULL_TA06_54_24_curated
40-residue YVTN family beta-propeller
13_1_40cm_4_scaffold_1414_8
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11500..13977)
DNA (2478bp) protein (826aa)
Bacterial group 1 Ig-like protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M8G9_9BACL
Bacterial group 1 Ig-like protein {ECO:0000313|EMBL:EGG36415.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
S-layer domain-containing protein
13_1_40cm_4_scaffold_1414_9
unknown

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comp(14068..14331)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 9 items

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