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13_1_40cm_4_scaffold_1419

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1419_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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3..428
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW63_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90866.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
13_1_40cm_4_scaffold_1419_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(409..1167)
DNA (759bp) protein (253aa)
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Peptidase S54, rhomboid domain protein
Rhomboid family protein id=4982279 bin=GWA2_Elusimicrobia_66_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_4_scaffold_1419_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1195..2439
DNA (1245bp) protein (415aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT
13_1_40cm_4_scaffold_1419_4
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2472..3836
DNA (1365bp) protein (455aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=CG_Delta_03
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
13_1_40cm_4_scaffold_1419_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3849..4265)
DNA (417bp) protein (139aa)
acT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acT domain-containing protein id=14429420 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
acT domain-containing protein
13_1_40cm_4_scaffold_1419_6
Balneola vulgaris, Balneola, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4389..5123
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003762967
13_1_40cm_4_scaffold_1419_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5197..6366
DNA (1170bp) protein (390aa)
Beta-lactamase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQP6_9BACT
Beta-lactamase {ECO:0000313|EMBL:EEF57828.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" so
flp2; beta-lactamase
13_1_40cm_4_scaffold_1419_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6375..7118)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003797C25
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89050.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1419_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(7139..8035)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000368C90A
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_1419_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8035..9519)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NZT3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91329.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1419_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9516..10697)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003619134
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91330.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1419_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10749..13115)
DNA (2367bp) protein (789aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate deaminase-like protein
13_1_40cm_4_scaffold_1419_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13182..13814)
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1419_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13954..14451
DNA (498bp) protein (166aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1419_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14448..16601)
DNA (2154bp) protein (718aa)
glutamate carboxypeptidase II (EC:3.4.17.21) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EF828
Transferrin receptor domain protein dimerization region
13_1_40cm_4_scaffold_1419_16
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16897..17502)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZY4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE12022.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
13_1_40cm_4_scaffold_1419_17
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17499..18698)
DNA (1200bp) protein (400aa)
Uncharacterized protein (Fragment) n=1 Tax=Roseobacter sp. MED193 RepID=A3XEZ0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ43613.1}; Flags: Fragment;; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
hypothetical protein
13_1_40cm_4_scaffold_1419_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18886..20016
DNA (1131bp) protein (377aa)
Sensor histidine kinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIX6_MYXFH
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase
13_1_40cm_4_scaffold_1419_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20107..21666
DNA (1560bp) protein (520aa)
peptidase M28 n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B55F13
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase m28
13_1_40cm_4_scaffold_1419_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21728..22207)
DNA (480bp) protein (160aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase
13_1_40cm_4_scaffold_1419_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22320..23948
DNA (1629bp) protein (543aa)
NAD-dependent aldehyde dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI13_RHOM4
delta-1-pyrroline-5-carboxylate dehydrogenase
13_1_40cm_4_scaffold_1419_22
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

23945..24565
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
lipoprotein
13_1_40cm_4_scaffold_1419_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24627..24806)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6K0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1419_24
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24887..25126)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI45_9CHLR
zinc finger CDGSH-type domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CCF84357.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
13_1_40cm_4_scaffold_1419_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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25199..26740
DNA (1542bp) protein (514aa)
hypothetical protein; K06888 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
N-acylglucosamine 2-epimerase
13_1_40cm_4_scaffold_1419_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

26817..27365
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_1419_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27362..27973
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HCY5_SALRM
isoamylase N-terminal domain-containing protein
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:ABC44976.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
13_1_40cm_4_scaffold_1419_28
unknown

Not on your lists

27985..28641
DNA (657bp) protein (219aa)
hypothetical protein
13_1_40cm_4_scaffold_1419_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28715..28999)
DNA (285bp) protein (95aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
glutamate N-acetyltransferase/amino-acid acetyltransferase
Displaying 29 items

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