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13_1_40cm_4_scaffold_1897

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1897_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3..1622
DNA (1620bp) protein (540aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chaperone protein dnaK
13_1_40cm_4_scaffold_1897_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1638..3203
DNA (1566bp) protein (522aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
putative S1 family peptidase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PDZ/DHR/GLGF domain protein
13_1_40cm_4_scaffold_1897_3
unknown

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comp(3210..3854)
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_40cm_4_scaffold_1897_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3896..4399
DNA (504bp) protein (168aa)
hypothetical protein
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_1897_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4359..5177)
DNA (819bp) protein (273aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AHG89948.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K02862 putative membrane protein id=14625151 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_1897_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5179..5502)
DNA (324bp) protein (108aa)
cytochrome C oxidase subunit IV
Cytochrome C oxidase subunit IV {ECO:0000313|EMBL:AHG89947.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24489208 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_4_scaffold_1897_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5517..6101)
DNA (585bp) protein (195aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1); K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c oxidase subunit III; K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-] id=24489207 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cytochrome c oxidase subunit III
13_1_40cm_4_scaffold_1897_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6103..7905)
DNA (1803bp) protein (601aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=24489206 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RBG_16_RIF_WS3X_71_46_curated
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1)
13_1_40cm_4_scaffold_1897_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7902..8933)
DNA (1032bp) protein (344aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=24489205 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cytochrome c oxidase subunit II (EC:1.9.3.1)
13_1_40cm_4_scaffold_1897_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..9952
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y971_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41439.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_1897_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9997..12156)
DNA (2160bp) protein (720aa)
Transcriptional regulator, SARP family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9Z3_ANAD2
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
SARP family transcriptional regulator
13_1_40cm_4_scaffold_1897_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12233..13117)
DNA (885bp) protein (295aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
xylose isomerase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
xylose isomerase domain-containing protein
13_1_40cm_4_scaffold_1897_13
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(13114..14799)
DNA (1686bp) protein (562aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIR6_TERRK
choline dehydrogenase-like flavoprotein
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AFL89134.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Ter
13_1_40cm_4_scaffold_1897_14
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14802..15377)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIR5_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL89133.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
13_1_40cm_4_scaffold_1897_15
unknown

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comp(16515..17159)
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_40cm_4_scaffold_1897_16
unknown

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comp(17220..18275)
DNA (1056bp) protein (352aa)

This feature has no annotations

13_1_40cm_4_scaffold_1897_17
unknown

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comp(18491..18616)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_4_scaffold_1897_18
unknown

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18923..19390
DNA (468bp) protein (156aa)

This feature has no annotations

Displaying 18 items

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