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13_1_40cm_4_scaffold_2681

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2681_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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64..1341
DNA (1278bp) protein (426aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG87780.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
HEAT repeat-containing PBS lyase
13_1_40cm_4_scaffold_2681_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1331..3022)
DNA (1692bp) protein (564aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_4_scaffold_2681_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3137..4396
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_4_scaffold_2681_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4396..6504
DNA (2109bp) protein (703aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
fadJ; enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.-)
Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM1_GEMAT
13_1_40cm_4_scaffold_2681_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6551..6859
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2681_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6856..7779
DNA (924bp) protein (308aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSGA_GEMAT
ribosome biogenesis GTPase RsgA
13_1_40cm_4_scaffold_2681_7
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9606..10166)
DNA (561bp) protein (187aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
13_1_40cm_4_scaffold_2681_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10222..10476
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2681_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10490..12166
DNA (1677bp) protein (559aa)
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
Putative metal-dependent hydrolase; K07047 id=17257035 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_4_scaffold_2681_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12182..12664)
DNA (483bp) protein (161aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_40cm_4_scaffold_2681_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12783..13328
DNA (546bp) protein (182aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_40cm_4_scaffold_2681_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13337..14494
DNA (1158bp) protein (386aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
Displaying 12 items

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