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13_1_40cm_4_scaffold_2887

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2887_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..428)
DNA (426bp) protein (142aa)
two-component response regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C48EF
putative two-component response regulator Tax=GWC2_Rokubacteria_70_16_curated
two-component system response regulator
13_1_40cm_4_scaffold_2887_2
unknown

Not on your lists

943..1194
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_2887_3
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1185..2411
DNA (1227bp) protein (409aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:AEG15303.1}; EC=2.6.1.50 {ECO:0000313|EMBL:AEG15303.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae
Glutamine--scyllo-inositol transaminase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI90_DESK7
13_1_40cm_4_scaffold_2887_4
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

2424..4328
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003A4BFEE
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_2887_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4380..5015
DNA (636bp) protein (212aa)
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:ABU57441.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ABU57441.1};; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflex
Undecaprenyl-phosphate galactose phosphotransferase id=4058030 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_2887_6
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5028..5762)
DNA (735bp) protein (245aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UMI5_9CHRO
haloacid dehalogenase superfamily enzyme, subfamily IA Tax=RBG_16_Gammaproteobacteria_66_13_curated
haloacid dehalogenase superfamily enzyme, subfamily IA
13_1_40cm_4_scaffold_2887_7
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5731..6276)
DNA (546bp) protein (182aa)
Carbamoylphosphate synthase large subunit n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9ULG0_9CHRO
carbamoylphosphate synthase large subunit
Carbamoylphosphate synthase large subunit {ECO:0000313|EMBL:AFY95660.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minu
13_1_40cm_4_scaffold_2887_8
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(6273..6650)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7KA91_9FIRM
transcriptional regulator Tax=RBG_16_Chloroflexi_64_43_curated
carbamoyl phosphate synthase-like protein
13_1_40cm_4_scaffold_2887_9
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(6679..7326)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G1L1_9RHIZ
hypothetical protein Tax=RBG_16_Chloroflexi_64_43_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_2887_10
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(7382..8359)
DNA (978bp) protein (326aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RBG_13_Chloroflexi_68_17_curated
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ68_ANATU
13_1_40cm_4_scaffold_2887_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9058..9276
DNA (219bp) protein (73aa)
Regulatory protein MarR n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE21_GALCS
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAO31151.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuri
13_1_40cm_4_scaffold_2887_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9273..10337
DNA (1065bp) protein (355aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=uncultured bacterium RepID=K1YIK7_9BACT
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG91029.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2887_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10402..11646
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=R9ZQ81_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR66813.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
13_1_40cm_4_scaffold_2887_14
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11734..13089
DNA (1356bp) protein (452aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI61_COLFT
tuaB; Teichuronic acid biosynthesis protein TuaB
Teichuronic acid biosynthesis protein TuaB {ECO:0000313|EMBL:AIY40051.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="C
13_1_40cm_4_scaffold_2887_15
unknown

Not on your lists

13091..13294
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_2887_16
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13291..14340
DNA (1050bp) protein (350aa)
Glycosyl transferase family 2 n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SUS5_BACT6
glycosyl transferase 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADV44420.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (s
13_1_40cm_4_scaffold_2887_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14376..15311
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDW9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82881.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_4_scaffold_2887_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15478..16341
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA013 RepID=U8USS9_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74995.1}; Similar to Glycosyl transferases group 1 {ECO:0000313|EMBL:AAM27768.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammap
glycosyl transferase family 1
13_1_40cm_4_scaffold_2887_19
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16462..17211
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9GSH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY49974.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;
hypothetical protein
13_1_40cm_4_scaffold_2887_20
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17204..17986)
DNA (783bp) protein (261aa)
Methylase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VIF0_9CYAN
Methylase {ECO:0000313|EMBL:ESA32395.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
type 11 methyltransferase
13_1_40cm_4_scaffold_2887_21
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18129..19856
DNA (1728bp) protein (576aa)
Dehydrogenase-like protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N514_9BURK
dehydrogenase-like protein
Dehydrogenase-like protein {ECO:0000313|EMBL:AGX86611.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis
13_1_40cm_4_scaffold_2887_22
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19862..20209
DNA (348bp) protein (116aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U683_9GAMM
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EGV20656.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_40cm_4_scaffold_2887_23
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20217..21314
DNA (1098bp) protein (366aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADC61203.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ADC61203.1};; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chroma
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RME5_ALLVD
13_1_40cm_4_scaffold_2887_24
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21468..23156
DNA (1689bp) protein (563aa)
Heparinase II/III n=1 Tax=Pseudomonas sp. Ag1 RepID=J1IEA8_9PSED
Heparinase II/III {ECO:0000313|EMBL:EJF69205.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
heparinase II/III
13_1_40cm_4_scaffold_2887_25
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23178..23423)
DNA (246bp) protein (82aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EXG84777.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EXG84777.1};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CFD4_9PLAN
13_1_40cm_4_scaffold_2887_26
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23438..24322)
DNA (885bp) protein (295aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ELS30612.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ELS30612.1};; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseu
dTDP-4-dehydrorhamnose reductase n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MRS4_9CYAN
dTDP-4-dehydrorhamnose reductase
13_1_40cm_4_scaffold_2887_27

Not on your lists

comp(24309..25328)
DNA (1020bp) protein (340aa)
Putative dTDP-D-glucose 4,6-dehydratase n=1 Tax=uncultured archaeon RepID=I3RKT3_9ARCH
Putative dTDP-D-glucose 4,6-dehydratase {ECO:0000313|EMBL:AFK24943.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_2887_28
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25325..25897)
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABK14743.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABK14743.1};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methan
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7R9_METTP
13_1_40cm_4_scaffold_2887_29
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25900..26808)
DNA (909bp) protein (303aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZQ0_LEPCP
glucose-1-phosphate thymidylyltransferase
13_1_40cm_4_scaffold_2887_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26772..28007)
DNA (1236bp) protein (412aa)
FAD dependent oxidoreductase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFK2_9EURY
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AHG03543.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL
FAD dependent oxidoreductase
Displaying items 1-30 of 32 in total

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