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13_1_40cm_4_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_289_1
unknown

Not on your lists

3..131
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_4_scaffold_289_2
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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211..633
DNA (423bp) protein (141aa)
Transposase IS200 like family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QC26_9CYAN
Transposase IS200 like family protein {ECO:0000313|EMBL:ERT04575.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;
transposase IS200
13_1_40cm_4_scaffold_289_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1394..3619)
DNA (2226bp) protein (742aa)
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:CDM64118.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CDM64118.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 protein id=2725679 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_4_scaffold_289_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3748..6777
DNA (3030bp) protein (1010aa)
TonB-dependent receptor plug n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRM7_HALH1
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEE49016.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomen
13_1_40cm_4_scaffold_289_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6816..8648
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00037AA626
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEE49017.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Hal
13_1_40cm_4_scaffold_289_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8767..9129
DNA (363bp) protein (121aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6X8_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEV98999.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
13_1_40cm_4_scaffold_289_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

9389..11296
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036AD2F0
fibronectin type III domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
fibronectin type III domain-containing protein
13_1_40cm_4_scaffold_289_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11293..12708
DNA (1416bp) protein (472aa)
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24457720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_4_scaffold_289_9
unknown

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comp(12730..13044)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_289_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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13322..13978
DNA (657bp) protein (219aa)
LuxR family two component transcriptional regulator Tax=RBG_16_Zixibacteria_53_22_curated
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=4707568 bin=GWC2_Ignavibacteria_38_9 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
two component LuxR family transcriptional regulator
13_1_40cm_4_scaffold_289_11
unknown

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comp(14316..14573)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_289_12
unknown

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comp(15671..16030)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_4_scaffold_289_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(16130..17986)
DNA (1857bp) protein (619aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_4_scaffold_289_14
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(18089..18412)
DNA (324bp) protein (108aa)
Chorismate mutase n=2 Tax=Rhodothermus marinus RepID=D0ME02_RHOM4
Chorismate mutase Tax=S_OP1_64_32
chorismate mutase, type II
13_1_40cm_4_scaffold_289_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18597..20882)
DNA (2286bp) protein (762aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGC6_9BACT
PAS/PAC sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF60977.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; P
13_1_40cm_4_scaffold_289_16
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20937..21692)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q096S9_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAU67685.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_1_40cm_4_scaffold_289_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21865..23133
DNA (1269bp) protein (423aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY5_GEMAT
protein of unknown function DUF445
Uncharacterized protein {ECO:0000313|EMBL:AHG91366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_289_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

23141..24889
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YT69_9ALTE
amidohydrolase Tax=RBG_13_Acidobacteria_68_16_curated
amidohydrolase
13_1_40cm_4_scaffold_289_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25114..25500)
DNA (387bp) protein (129aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_289_20
unknown

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25694..26119
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_4_scaffold_289_21
unknown

Not on your lists

26238..26837
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_40cm_4_scaffold_289_22
bacterium UASB270, Bacteria

Not on your lists

26899..27948
DNA (1050bp) protein (350aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK61479.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
id=12554872 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_4_scaffold_289_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27969..29564)
DNA (1596bp) protein (532aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC16_GEMAT
protein kinase
13_1_40cm_4_scaffold_289_24
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

29682..30317
DNA (636bp) protein (212aa)
Tax=RBG_16_Chloroflexi_54_18_curated
13_1_40cm_4_scaffold_289_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(30330..31712)
DNA (1383bp) protein (461aa)
di-heme cytochrome c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Di-haem cytochrome c peroxidase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQL6_9AQUI
Di-heme cytochrome c peroxidase
13_1_40cm_4_scaffold_289_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(31725..33251)
DNA (1527bp) protein (509aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_289_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(33375..34538)
DNA (1164bp) protein (388aa)
Macrolide ABC transport system permease protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDQ3_9BURK
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_40cm_4_scaffold_289_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(34535..35677)
DNA (1143bp) protein (381aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MacB-like periplasmic core domain protein
hypothetical protein; K02004 putative ABC transport system permease protein id=24463454 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfovibrio sp. FW1012B genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_4_scaffold_289_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(35674..37593)
DNA (1920bp) protein (640aa)
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG93527.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC transporter related, ATP binding protein id=4880418 bin=GWC2_Ignavibacteria_56_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_4_scaffold_289_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(37665..38459)
DNA (795bp) protein (265aa)
putative arsenite S-adenosylmethyltransferase (EC:2.1.1.137)
Methyltransferase type 11 id=4759444 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
arsM; arsenite S-adenosylmethyltransferase Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 57 in total

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