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13_1_40cm_4_scaffold_297

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_297_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..634
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003669927
RagB/SusD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RagB/SusD domain-containing protein
13_1_40cm_4_scaffold_297_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(650..1870)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037254B5
ASPIC/UnbV-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ASPIC/UnbV domain protein
13_1_40cm_4_scaffold_297_3
unknown

Not on your lists

2289..3386
DNA (1098bp) protein (366aa)

This feature has no annotations

13_1_40cm_4_scaffold_297_4
unknown

Not on your lists

3604..3795
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_297_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4092..6407
DNA (2316bp) protein (772aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_297_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6404..8011
DNA (1608bp) protein (536aa)
symporter n=1 Tax=Salisaeta longa RepID=UPI0003B46B0A
Putative symporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
symporter
13_1_40cm_4_scaffold_297_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8008..9681
DNA (1674bp) protein (558aa)
tre37A; trehalase tre37A (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003644C73
glycoside hydrolase family 37
13_1_40cm_4_scaffold_297_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9725..11350
DNA (1626bp) protein (542aa)
TPR repeat protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZIQ6_9PROT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_297_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11373..12272
DNA (900bp) protein (300aa)
Putative M23B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X7_GEMAT
putative M23B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative M23B family peptidase
13_1_40cm_4_scaffold_297_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12269..13255)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TG2_METBU
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_297_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13316..15172)
DNA (1857bp) protein (619aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_4_scaffold_297_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15223..20427)
DNA (5205bp) protein (1735aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VE1_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE72161.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
peptidase families s8 and s53 domain-containing protein
13_1_40cm_4_scaffold_297_13
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20635..21570
DNA (936bp) protein (312aa)
Transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQN5_MESAW
transcriptional regulator Tax=RBG_16_Deltaproteobacteria_50_11_curated
transcriptional regulator
13_1_40cm_4_scaffold_297_14
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21567..22322
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q096S9_STIAD
S-adenosyl-L-methionine-dependent methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AJE19854.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_1_40cm_4_scaffold_297_15
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22330..23523)
DNA (1194bp) protein (398aa)
Probable lipoprotein id=4178914 bin=GWA2_Ignavibacteria_55_11 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
lipoprotein precursor Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_40cm_4_scaffold_297_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(23651..24118)
DNA (468bp) protein (156aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNH2_ROSCS
13_1_40cm_4_scaffold_297_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24228..24638)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_297_18
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24802..26220
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXL0_OPITP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
13_1_40cm_4_scaffold_297_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26094..27614)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_297_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27706..28236)
DNA (531bp) protein (177aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88655.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_297_21
unknown

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comp(28233..28952)
DNA (720bp) protein (240aa)

This feature has no annotations

Displaying 21 items

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