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13_1_40cm_4_scaffold_298

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_298_1
unknown

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comp(2..130)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_4_scaffold_298_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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661..1491
DNA (831bp) protein (277aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_298_3
unknown

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1695..2060
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_298_4
unknown

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comp(2072..2614)
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_4_scaffold_298_5
unknown

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comp(2611..3162)
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_4_scaffold_298_6
unknown

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comp(3172..4224)
DNA (1053bp) protein (351aa)

This feature has no annotations

13_1_40cm_4_scaffold_298_7
unknown

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comp(4273..4620)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_298_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4730..5929
DNA (1200bp) protein (400aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLW3_THEM7
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaero
13_1_40cm_4_scaffold_298_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5926..7140
DNA (1215bp) protein (405aa)
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_Gemmatimonadetes_66_8_curated
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] id=14424435 bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
13_1_40cm_4_scaffold_298_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7137..8633
DNA (1497bp) protein (499aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWY8_RUBXD
13_1_40cm_4_scaffold_298_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8630..10444
DNA (1815bp) protein (605aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_298_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10498..11367
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A922_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Conserved hypothetical protein CHP00255
13_1_40cm_4_scaffold_298_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11364..12032
DNA (669bp) protein (223aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A921_GEMAT
13_1_40cm_4_scaffold_298_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12042..12254
DNA (213bp) protein (71aa)
Putative RNA polymerase omega subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT
rpoZ; putative RNA polymerase omega subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpoZ; putative RNA polymerase omega subunit
13_1_40cm_4_scaffold_298_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12254..13444
DNA (1191bp) protein (397aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBJ9_9FIRM
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AHG90856.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS7
13_1_40cm_4_scaffold_298_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13441..14241
DNA (801bp) protein (267aa)
putative DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A919_GEMAT
phage SPO1 DNA polymerase-related protein
13_1_40cm_4_scaffold_298_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14204..15619
DNA (1416bp) protein (472aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A918_GEMAT
13_1_40cm_4_scaffold_298_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15612..16970
DNA (1359bp) protein (453aa)
DNA repair protein radA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A917_GEMAT
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
radA; DNA repair protein RadA
13_1_40cm_4_scaffold_298_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16942..17646
DNA (705bp) protein (235aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A916_GEMAT
13_1_40cm_4_scaffold_298_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17643..18296
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A915_GEMAT
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Sua5/YciO/YrdC/YwlC family protein
13_1_40cm_4_scaffold_298_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18302..18781
DNA (480bp) protein (160aa)
protein-tyrosine-phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-tyrosine-phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A914_GEMAT
Phosphotyrosine protein phosphatase I superfamily
13_1_40cm_4_scaffold_298_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18765..19610
DNA (846bp) protein (282aa)
Shikimate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A913_GEMAT
aroE; shikimate 5-dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Shikimate dehydrogenase
13_1_40cm_4_scaffold_298_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19723..20358
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A912_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_298_24
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20370..21380
DNA (1011bp) protein (337aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RBG_13_Deltaproteobacteria_52_11_curated
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A911_GEMAT
glyceraldehyde-3-phosphate dehydrogenase, type I
13_1_40cm_4_scaffold_298_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21377..22558
DNA (1182bp) protein (394aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoglycerate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A910_GEMAT
Phosphoglycerate kinase
13_1_40cm_4_scaffold_298_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22555..22920
DNA (366bp) protein (122aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Triosephosphate isomerase n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=TPIS_ACAM1
Triosephosphate isomerase, bacterial/eukaryotic
Displaying 26 items

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