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13_1_40cm_4_scaffold_3663

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3663_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..559)
DNA (558bp) protein (186aa)
Elongation factor Ts n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=EFTS_THEM4
translation elongation factor Ts (EF-Ts); K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tsf; elongation factor Ts
13_1_40cm_4_scaffold_3663_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(650..1531)
DNA (882bp) protein (294aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S2
13_1_40cm_4_scaffold_3663_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1645..2052)
DNA (408bp) protein (136aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsI; 30S ribosomal protein S9
13_1_40cm_4_scaffold_3663_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2049..2492)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplM; 50S ribosomal protein L13
13_1_40cm_4_scaffold_3663_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2563..3081)
DNA (519bp) protein (173aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAH38822.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_40cm_4_scaffold_3663_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3206..4477)
DNA (1272bp) protein (424aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
13_1_40cm_4_scaffold_3663_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4474..5994)
DNA (1521bp) protein (507aa)
acyl-CoA carboxylase alpha chain (EC:6.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acyl-CoA carboxylase alpha chain (EC:6.4.1.-)
Acyl-CoA carboxylase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT
13_1_40cm_4_scaffold_3663_8
unknown

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comp(6035..6997)
DNA (963bp) protein (321aa)

This feature has no annotations

13_1_40cm_4_scaffold_3663_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6978..8489)
DNA (1512bp) protein (504aa)
acyl-CoA carboxylase beta chain (EC:6.4.1.-); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acyl-CoA carboxylase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A400_GEMAT
carboxyl transferase
13_1_40cm_4_scaffold_3663_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(8607..10322)
DNA (1716bp) protein (572aa)
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA binding S1 domain protein
13_1_40cm_4_scaffold_3663_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10394..11095)
DNA (702bp) protein (234aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bifunctional pantoate ligase/cytidylate kinase n=1 Tax=Synechococcus sp. CB0205 RepID=UPI0002002F6C
Cytidylate kinase
13_1_40cm_4_scaffold_3663_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11092..12375)
DNA (1284bp) protein (428aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037E8197
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_40cm_4_scaffold_3663_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12372..13214)
DNA (843bp) protein (281aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Prephenate dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J1_CONWI
prephenate dehydrogenase
13_1_40cm_4_scaffold_3663_14
unknown

Not on your lists

comp(13283..13549)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 14 items

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