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13_1_40cm_4_scaffold_369

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_369_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..815)
DNA (813bp) protein (271aa)
ctpA; carboxyl-terminal processing protease precursor (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
13_1_40cm_4_scaffold_369_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(874..1521)
DNA (648bp) protein (216aa)
tmk; dTMP kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B8_SPHTD
13_1_40cm_4_scaffold_369_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1521..1874)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF964
13_1_40cm_4_scaffold_369_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1871..2341)
DNA (471bp) protein (157aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Release factor glutamine methyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67TD4_SYMTH
protoporphyrinogen oxidase
13_1_40cm_4_scaffold_369_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2338..2757)
DNA (420bp) protein (140aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_369_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2750..3808)
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L6_GEMAT
Peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
13_1_40cm_4_scaffold_369_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(3812..4024)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MIX9_9BACT
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmE; 50S ribosomal protein L31
13_1_40cm_4_scaffold_369_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4189..4860
DNA (672bp) protein (224aa)
Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L5_GEMAT
Crp family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
Crp family transcriptional regulator
13_1_40cm_4_scaffold_369_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4938..5822
DNA (885bp) protein (295aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Metallo-beta-lactamase family protein id=2777649 bin=GWC2_Chloroflexi_73_18 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
beta-lactamase superfamily metal-dependent hydrolase
13_1_40cm_4_scaffold_369_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5838..6548
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Curli production assembly/transport component CsgG
13_1_40cm_4_scaffold_369_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6556..7335
DNA (780bp) protein (260aa)
putative ABC transporter permease; K02066 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter permease
Uncharacterized protein id=2008172 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_4_scaffold_369_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7340..8035
DNA (696bp) protein (232aa)
Methionine import ATP-binding protein metN (EC:3.6.3.-)
ABC transporter n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00036049B0
mlaF_[H]; putative ABC transporter, ATP-binding protein YrbF Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_369_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8048..8980
DNA (933bp) protein (311aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_369_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8977..10914
DNA (1938bp) protein (646aa)
metal dependent phosphohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Metal dependent phosphohydrolase id=4372559 bin=GWA2_Planctomycetia_40_7 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
response regulator with HD-GYP domain
13_1_40cm_4_scaffold_369_15
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(10911..11270)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQR4_MEIRD
hypothetical protein; K07090 Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
13_1_40cm_4_scaffold_369_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11267..12835)
DNA (1569bp) protein (523aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD9_RUBXD
Hydantoinase B/oxoprolinase
13_1_40cm_4_scaffold_369_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12832..14832)
DNA (2001bp) protein (667aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATE0_RUBXD
13_1_40cm_4_scaffold_369_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14962..16476)
DNA (1515bp) protein (505aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Apolipoprotein N-acyltransferase id=4703362 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
apolipoprotein N-acyltransferase
13_1_40cm_4_scaffold_369_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16500..17507)
DNA (1008bp) protein (336aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase domain protein
13_1_40cm_4_scaffold_369_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17504..18193)
DNA (690bp) protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_369_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18177..19178)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
Displaying 21 items

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