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13_1_40cm_4_scaffold_4081

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4081_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W7_GEMAT
putative pilin Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
African swine fever virus j13L
13_1_40cm_4_scaffold_4081_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(322..1869)
DNA (1548bp) protein (516aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GUAA_GEMAT
GMP synthase [glutamine-hydrolyzing]
13_1_40cm_4_scaffold_4081_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1866..3137)
DNA (1272bp) protein (424aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
diaminopimelate decarboxylase
13_1_40cm_4_scaffold_4081_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(3177..4670)
DNA (1494bp) protein (498aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Proline--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X0_GEMAT
Prolyl-tRNA synthetase
13_1_40cm_4_scaffold_4081_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(4670..5938)
DNA (1269bp) protein (423aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Histidyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X1_GEMAT
Histidyl-tRNA synthetase
13_1_40cm_4_scaffold_4081_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5948..7177)
DNA (1230bp) protein (410aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=GWC2_Gemmatimonadetes_71_10_curated
folC; folylpolyglutamate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X2_GEMAT
13_1_40cm_4_scaffold_4081_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7183..8049)
DNA (867bp) protein (289aa)
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2); K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X3_GEMAT
13_1_40cm_4_scaffold_4081_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8122..9369)
DNA (1248bp) protein (416aa)
Rod shape determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X4_GEMAT
mrdB; rod shape determining protein; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein RodA
13_1_40cm_4_scaffold_4081_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9341..11245)
DNA (1905bp) protein (635aa)
Penicillin-binding protein 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X5_GEMAT
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mrdA; penicillin-binding protein 2
13_1_40cm_4_scaffold_4081_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11242..11739)
DNA (498bp) protein (166aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X6_GEMAT
hypothetical membrane protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein MreD
13_1_40cm_4_scaffold_4081_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11736..12587)
DNA (852bp) protein (284aa)
Rod shape-determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X7_GEMAT
rod shape-determining protein; K03570 rod shape-determining protein MreC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein
13_1_40cm_4_scaffold_4081_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12592..13521)
DNA (930bp) protein (310aa)
Rod shape-determining protein MreB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X8_GEMAT
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_Gemmatimonadetes_66_8_curated
mreB; rod shape-determining protein MreB
13_1_40cm_4_scaffold_4081_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13676..15337)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P1_GEMAT
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG87858.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4081_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15457..15660
DNA (204bp) protein (68aa)
ferredoxin-NADP reductase; K15511 benzoyl-CoA 2,3-dioxygenase component A [EC:1.14.12.21]
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_4081_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15609..16832
DNA (1224bp) protein (408aa)
Dehydrogenase flavoprotein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Dehydrogenase flavoprotein id=3442211 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Dehydrogenase flavoprotein
13_1_40cm_4_scaffold_4081_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16910..17818
DNA (909bp) protein (303aa)
fabI; enoyl-(acyl carrier protein) reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ6_GEMAT
enoyl-(acyl carrier protein) reductase
13_1_40cm_4_scaffold_4081_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17858..18667)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002EF5248
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
family 2 glycosyl transferase
13_1_40cm_4_scaffold_4081_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18694..19806)
DNA (1113bp) protein (371aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X9_GEMAT
alanine dehydrogenase
13_1_40cm_4_scaffold_4081_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19803..20450)
DNA (648bp) protein (216aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
putative S16B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M16 domain protein
Displaying 19 items

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