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13_1_40cm_4_scaffold_4509

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4509_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1..222)
DNA (222bp) protein (74aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUS8_KORVE
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter related protein
13_1_40cm_4_scaffold_4509_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(308..1549)
DNA (1242bp) protein (414aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC94_GEMAT
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
RND family efflux transporter MFP subunit
13_1_40cm_4_scaffold_4509_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1762..3366)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_4509_4
unknown

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comp(3425..3952)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_4_scaffold_4509_5
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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4139..5983
DNA (1845bp) protein (615aa)
Hydrolase CocE/NonD family protein id=4927116 bin=GWA2_Ignavibacteria_55_11 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative hydrolase; K06978 Tax=RBG_16_Aminicenantes_63_16_curated
hydrolase CocE/NonD family protein
13_1_40cm_4_scaffold_4509_6

Not on your lists

6021..7067
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036CA5E6
Marine sediment metagenome DNA, contig: S12H4_L01509 {ECO:0000313|EMBL:GAI87705.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_4509_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7052..7897
DNA (846bp) protein (282aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA99_9SPHN
hypothetical protein
13_1_40cm_4_scaffold_4509_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7905..11147
DNA (3243bp) protein (1081aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
ppk; polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034AA6B0
13_1_40cm_4_scaffold_4509_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11284..12120
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003827C7F
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_4509_10
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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12883..13350
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6X7_9ACTN
regulator of chromosome condensation, RCC1
Regulator of chromosome condensation, RCC1 {ECO:0000313|EMBL:AHI05439.1}; TaxID=765869 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" so
13_1_40cm_4_scaffold_4509_11
unknown

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comp(13354..14838)
DNA (1485bp) protein (495aa)

This feature has no annotations

13_1_40cm_4_scaffold_4509_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14994..16127
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
13_1_40cm_4_scaffold_4509_13
unknown

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comp(16144..16374)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_4_scaffold_4509_14
GWB2_WWE3_43_22_part, WWE3, Bacteria

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16622..17254
DNA (633bp) protein (211aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKT09720.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
transmembrane_regions 4..21 id=725386 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Displaying 14 items

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