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13_1_40cm_4_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5_1
unknown

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1..84
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_4_scaffold_5_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258..842)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PV52_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:CDH47666.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
13_1_40cm_4_scaffold_5_trna_1
unknown

Not on your lists

comp(1093..1165)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_5_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1394..1876
DNA (483bp) protein (161aa)
N-acetyltransferase GCN5; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
GCN5-related N-acetyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS40_RUBXD
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_5_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1873..2841
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NVA9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17920.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
13_1_40cm_4_scaffold_5_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2886..3716)
DNA (831bp) protein (277aa)
Putative oxidoreductase/dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXS7_AZOBR
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIB16049.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
13_1_40cm_4_scaffold_5_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4036..6141)
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXS8_AZOBR
conserved protein of unknown function; xylose isomerase-like domain
Uncharacterized protein {ECO:0000313|EMBL:CCD02687.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
13_1_40cm_4_scaffold_5_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6141..6758)
DNA (618bp) protein (206aa)
Protein GrpE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F5_GEMAT
grpE; GrpE protein; K03687 molecular chaperone GrpE Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein grpE
13_1_40cm_4_scaffold_5_8
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6951..7775)
DNA (825bp) protein (275aa)
Lysophospholipase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WB88_DESOD
hypothetical protein Tax=CG_Delta_07
lysophospholipase
13_1_40cm_4_scaffold_5_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7775..9034)
DNA (1260bp) protein (420aa)
CinA-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CINAL_GEMAT
CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Competence-damaged protein
13_1_40cm_4_scaffold_5_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9031..9672)
DNA (642bp) protein (214aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E9_GEMAT
13_1_40cm_4_scaffold_5_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9685..10359)
DNA (675bp) protein (225aa)
Gliding motility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E8_GEMAT
gliding motility protein; K06883 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gliding motility protein
13_1_40cm_4_scaffold_5_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10372..10860)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_5_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10874..11476)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E6_GEMAT
recR; recombination protein RecR; K06187 recombination protein RecR Tax=GWC2_Gemmatimonadetes_71_10_curated
recR; recombination protein RecR
13_1_40cm_4_scaffold_5_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11483..11800)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037BEE41
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0133 protein ybaB
13_1_40cm_4_scaffold_5_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11838..13484)
DNA (1647bp) protein (549aa)
dnaX; DNA polymerase III gamma and tau subunit (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III gamma and tau subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E4_GEMAT
DNA polymerase III, subunits gamma and tau
13_1_40cm_4_scaffold_5_16
unknown

Not on your lists

comp(13799..14950)
DNA (1152bp) protein (384aa)

This feature has no annotations

13_1_40cm_4_scaffold_5_17
unknown

Not on your lists

comp(14962..15363)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_5_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15360..16583)
DNA (1224bp) protein (408aa)
Mov34/MPN/PAD-1 family protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_4_scaffold_5_19
unknown

Not on your lists

comp(16753..17796)
DNA (1044bp) protein (348aa)

This feature has no annotations

13_1_40cm_4_scaffold_5_20
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17781..19490)
DNA (1710bp) protein (570aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6V3_9DELT
Radical SAM domain protein {ECO:0000313|EMBL:EHJ48038.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfo
PARCEL domain-containing protein
13_1_40cm_4_scaffold_5_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19524..20489)
DNA (966bp) protein (322aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E2_GEMAT
13_1_40cm_4_scaffold_5_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20558..21451)
DNA (894bp) protein (298aa)
tRNA-processing ribonuclease BN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E1_GEMAT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
13_1_40cm_4_scaffold_5_23
unknown

Not on your lists

comp(21448..21753)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_5_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21750..22967)
DNA (1218bp) protein (406aa)
Aldolase n=1 Tax=uncultured prokaryote RepID=H5S9P5_9ZZZZ
putative fructose-bisphosphate aldolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative fructose-bisphosphate aldolase
13_1_40cm_4_scaffold_5_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23231..24010)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_40cm_4_scaffold_5_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24012..25415)
DNA (1404bp) protein (468aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyruvate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D6_GEMAT
pyruvate kinase
13_1_40cm_4_scaffold_5_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25412..26191)
DNA (780bp) protein (260aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD-dependent protein deacylase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FE61_VERMA
silent information regulator protein Sir2
13_1_40cm_4_scaffold_5_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26405..26866)
DNA (462bp) protein (154aa)
MarR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUV7_9SPHN
DNA, contig: SP650 {ECO:0000313|EMBL:GAN15115.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
MarR family transcriptional regulator
13_1_40cm_4_scaffold_5_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26962..27681
DNA (720bp) protein (240aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A524_GEMAT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG87772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 60 in total

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