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13_1_40cm_4_scaffold_5338

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5338_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1..264
DNA (264bp) protein (88aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=14425620 bin=bin1_lowGC species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CSP1_2_Dadabacteria
DEAD/DEAH box helicase
13_1_40cm_4_scaffold_5338_2
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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385..1608
DNA (1224bp) protein (408aa)
DNA polymerase IV subunit kappa; K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RBG_13_Deltaproteobacteria_61_14_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003707A12
13_1_40cm_4_scaffold_5338_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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1605..4988
DNA (3384bp) protein (1128aa)
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Acidobacteria_68_9_curated
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFC6_9BACT
13_1_40cm_4_scaffold_5338_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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4985..5488
DNA (504bp) protein (168aa)
PEP phosphonomutase-like protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PEP phosphonomutase-like protein id=14626847 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_5338_5

Not on your lists

5682..6425
DNA (744bp) protein (248aa)
Conserved protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR8_9BACT
Conserved protein {ECO:0000313|EMBL:AHN97952.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
13_1_40cm_4_scaffold_5338_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(6415..7509)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH4_GEMAT
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
Radical SAM domain protein
13_1_40cm_4_scaffold_5338_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7696..9132)
DNA (1437bp) protein (479aa)
Amino acid transporter, L-type amino acid transporter (LAT) family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8J5_ACIC5
amino acid transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
L-type amino acid transporter (LAT) family transporter
13_1_40cm_4_scaffold_5338_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9239..9853
DNA (615bp) protein (205aa)
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative phosphate transport regulator
Uncharacterized protein id=1900756 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_5338_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9853..10890
DNA (1038bp) protein (346aa)
Low-affinity inorganic phosphate transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB09_GEMAT
phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=GWC2_Gemmatimonadetes_71_10_curated
pit; low-affinity inorganic phosphate transporter
13_1_40cm_4_scaffold_5338_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10819..11550)
DNA (732bp) protein (244aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Signal transduction histidine kinase id=4798578 bin=GWC2_Nitrospirae-rel_56_14 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
response regulator receiver protein
13_1_40cm_4_scaffold_5338_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(11550..12506)
DNA (957bp) protein (319aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_16_Acidobacteria_68_9_curated
Ornithine cyclodeaminase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YN17_MOBAS
multidrug DMT transporter permease
13_1_40cm_4_scaffold_5338_12
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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comp(12512..13474)
DNA (963bp) protein (321aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] id=24551193 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
putative aminotransferase (EC:2.6.1.-)
Displaying 12 items

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