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13_1_40cm_4_scaffold_5546

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5546_1
unknown

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3..440
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_5546_2
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(487..1431)
DNA (945bp) protein (315aa)
ADP-ribosyl-(Dinitrogen reductase) hydrolase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P8P0_9EURY
ADP-ribosyl-(Dinitrogen reductase) hydrolase {ECO:0000313|EMBL:EMA66223.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
ADP-ribosylglycohydrolase
13_1_40cm_4_scaffold_5546_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1485..2354
DNA (870bp) protein (290aa)
Phospholipase/carboxylesterase superfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VN15_9CYAN
alpha/beta hydrolase fold protein; K06889 Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein
13_1_40cm_4_scaffold_5546_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2351..3193)
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_5546_5
RLO_PLX_64_10, Bacteria

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3432..4508
DNA (1077bp) protein (359aa)
putative Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=14631615 bin=bin9_gal15 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
putative branched-chain amino acid-binding protein
13_1_40cm_4_scaffold_5546_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4505..6205
DNA (1701bp) protein (567aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_40cm_4_scaffold_5546_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6202..6516)
DNA (315bp) protein (105aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_5546_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6588..7730)
DNA (1143bp) protein (381aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_5546_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7741..9129)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_5546_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9201..9464)
DNA (264bp) protein (88aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_5546_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9872..10066
DNA (195bp) protein (65aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_1_40cm_4_scaffold_5546_12
unknown

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comp(10129..10599)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_5546_13
unknown

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comp(10596..11237)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_4_scaffold_5546_14
unknown

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comp(11330..12640)
DNA (1311bp) protein (437aa)

This feature has no annotations

13_1_40cm_4_scaffold_5546_15
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(12715..13020)
DNA (306bp) protein (102aa)
cytochrome c, class I Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
cytochrome c class I id=14424783 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
cytochrome c family protein
Displaying 15 items

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