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13_1_40cm_4_scaffold_5784

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5784_1
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..783
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B545DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII53166.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_1_40cm_4_scaffold_5784_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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849..1412
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38781.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_5784_3
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1413..2102
DNA (690bp) protein (230aa)
Putative membrane associated protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0STG7_PLABD
membrane associated protein
Putative membrane associated protein {ECO:0000313|EMBL:ADY60429.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubini
13_1_40cm_4_scaffold_5784_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2099..2599
DNA (501bp) protein (167aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_5784_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2948..4033)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT id=5223895 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
protein of unknown function DUF4098
13_1_40cm_4_scaffold_5784_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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4051..4614
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTR6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
putative membrane protein
13_1_40cm_4_scaffold_5784_7
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4616..5626
DNA (1011bp) protein (337aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IU88_9PORP
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:ERJ71372.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
hypothetical protein
13_1_40cm_4_scaffold_5784_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5623..6906
DNA (1284bp) protein (428aa)
L-sorbosone dehydrogenase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F9_NITHN
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AHG90403.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5784_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6929..7336
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Leptospira licerasiae RepID=I0XV97_9LEPT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_5784_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7349..8509
DNA (1161bp) protein (387aa)
Acyl-Coenzyme A dehydrogenase, short/branched chain n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F118_SORC5
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETX05175.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_5784_11
R_OP11_Roizmanbacteria_39_12c, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(8569..10542)
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C74EDD
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12c_curated
kelch motif-containing protein
13_1_40cm_4_scaffold_5784_12
unknown

Not on your lists

11000..11341
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_5784_13
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11401..13482)
DNA (2082bp) protein (694aa)
kelch domain-containing protein Tax=GWF2_Elusimicrobia_62_30_curated
Fibronectin type III domain protein id=4056908 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
branched-chain amino acid ABC transporter2C amino acid-binding protein
13_1_40cm_4_scaffold_5784_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13748..14905
DNA (1158bp) protein (386aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
13_1_40cm_4_scaffold_5784_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14889..16346)
DNA (1458bp) protein (486aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_4_scaffold_5784_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16587..18515)
DNA (1929bp) protein (643aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_4_scaffold_5784_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

18594..19634
DNA (1041bp) protein (347aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI45_CHLTF
putative oligopeptide transporter, OPT family
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:AEP11261.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacter
Displaying 17 items

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