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13_1_40cm_4_scaffold_582

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_582_1
unknown

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comp(3..755)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_4_scaffold_582_2
unknown

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comp(763..1602)
DNA (840bp) protein (280aa)

This feature has no annotations

13_1_40cm_4_scaffold_582_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1602..2036)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003713DB1
Putative CoA-binding protein {ECO:0000313|EMBL:EJE53573.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. C
CoA-binding protein
13_1_40cm_4_scaffold_582_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2033..2752)
DNA (720bp) protein (240aa)
Formate dehydrogenase accessory protein FdhD n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EI48_GEOBB
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
nitrate assimilation protein NarQ or formate dehydrogenase accessory protein FdhD
13_1_40cm_4_scaffold_582_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2796..3188)
DNA (393bp) protein (131aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
6-pyruvoyl tetrahydropterin synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6991C
6-pyruvoyl tetrahydropterin synthase family protein
13_1_40cm_4_scaffold_582_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3372..4196)
DNA (825bp) protein (275aa)
ABC transporter related protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X5I1_DESRD
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter
13_1_40cm_4_scaffold_582_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(4189..4884)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
ABC transporter permease; K05773 tungstate transport system permease protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_582_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4872..5606)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB95_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91460.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_582_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5606..7180)
DNA (1575bp) protein (525aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_4_scaffold_582_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7191..8243
DNA (1053bp) protein (351aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_582_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8240..8563
DNA (324bp) protein (108aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_1_40cm_4_scaffold_582_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8572..10029
DNA (1458bp) protein (486aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_4_scaffold_582_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10171..11622
DNA (1452bp) protein (484aa)
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4983172 bin=GWA2_Elusimicrobia_56_46 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
amino acid transporter
13_1_40cm_4_scaffold_582_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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11739..12785
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoesterase RecJ domain protein
13_1_40cm_4_scaffold_582_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12845..13273
DNA (429bp) protein (143aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RS7_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE66749.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
peptidase s8 and s53 subtilisin kexin sedolisin
13_1_40cm_4_scaffold_582_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13328..14485
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase-like, ParA/MinD
13_1_40cm_4_scaffold_582_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14487..15260
DNA (774bp) protein (258aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_582_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15257..16597
DNA (1341bp) protein (447aa)
Putative multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB83_GEMAT
putative multidrug resistance protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative multidrug resistance protein
13_1_40cm_4_scaffold_582_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16597..17343
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB82_GEMAT
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF62
13_1_40cm_4_scaffold_582_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17374..17595)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB79_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39485.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_582_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17620..18204)
DNA (585bp) protein (195aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_582_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18254..19000
DNA (747bp) protein (249aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB77_GEMAT
13_1_40cm_4_scaffold_582_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18987..20465
DNA (1479bp) protein (493aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB76_GEMAT
menaquinone biosynthesis decarboxylase, SCO4490 family
Menaquinone biosynthesis decarboxylase, SCO4490 family {ECO:0000313|EMBL:AHG91443.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_582_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20462..21382
DNA (921bp) protein (307aa)
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB75_GEMAT
4-hydroxybenzoate polyprenyltransferase
13_1_40cm_4_scaffold_582_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21534..22127
DNA (594bp) protein (198aa)
aromatic acid decarboxylase (EC:4.1.1.-); K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aromatic acid decarboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB74_GEMAT
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
13_1_40cm_4_scaffold_582_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22131..22604
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB72_GEMAT
hypothetical protein; K07095 Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Displaying 26 items

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