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13_1_40cm_4_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_57_1
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(41..799)
DNA (759bp) protein (253aa)
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ09_9BACT
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAL58245.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_1_40cm_4_scaffold_57_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(796..1131)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG90_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90881.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_57_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1143..2516)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A938_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_57_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2513..5422)
DNA (2910bp) protein (970aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ial:IALB_3165 Subtilisin-like serine protease id=718195 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
subtilisin-like serine protease
13_1_40cm_4_scaffold_57_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5419..6999)
DNA (1581bp) protein (527aa)
putative acyl-CoA carboxylase beta subunit (EC:6.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative acyl-CoA carboxylase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A939_GEMAT
carboxyl transferase
13_1_40cm_4_scaffold_57_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7036..7455)
DNA (420bp) protein (140aa)
Putative isobutyryl-CoA mutase small subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A940_GEMAT
Methylmalonyl-CoA mutase domain-containing protein
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:AHG90884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_57_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7455..8567)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUE0_9AQUI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptide chain release factor 1 (eRF1)-like protein
13_1_40cm_4_scaffold_57_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8570..10132)
DNA (1563bp) protein (521aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methylmalonyl-CoA mutase n=1 Tax=Desulfurispora thermophila RepID=UPI0003649C1D
methylmalonyl-CoA mutase, large subunit
13_1_40cm_4_scaffold_57_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10129..11202)
DNA (1074bp) protein (358aa)
putative transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
LAO/AO transport system ATPase
13_1_40cm_4_scaffold_57_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11245..12567)
DNA (1323bp) protein (441aa)
Magnesium transporter n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGK1_ANADE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source=
magnesium transporter
13_1_40cm_4_scaffold_57_11
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12641..13846)
DNA (1206bp) protein (402aa)
CBS domain containing protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZP2_ACIFD
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:ACU54200.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" s
13_1_40cm_4_scaffold_57_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13843..15030)
DNA (1188bp) protein (396aa)
Transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
13_1_40cm_4_scaffold_57_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15027..15383)
DNA (357bp) protein (119aa)
Endoribonuclease YbeY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_57_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15412..17592)
DNA (2181bp) protein (727aa)
Putative domain HDIG-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPX0_9FIRM
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_57_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17594..18553)
DNA (960bp) protein (320aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:BAH38756.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / D
13_1_40cm_4_scaffold_57_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(18550..20313)
DNA (1764bp) protein (588aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_57_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20319..20774)
DNA (456bp) protein (152aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative PTS IIA-like nitrogen-regulatory protein PtsN id=2244663 bin=GWB2_Proteobacteria_55_19 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PTS IIA-like nitrogen-regulatory protein PtsN
13_1_40cm_4_scaffold_57_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20825..21748
DNA (924bp) protein (308aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_57_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21745..22812
DNA (1068bp) protein (356aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
hypothetical protein
13_1_40cm_4_scaffold_57_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22750..23169)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_57_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23166..23660)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_40cm_4_scaffold_57_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(23660..24529)
DNA (870bp) protein (290aa)
pantoate/beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1L9_SPHTD
13_1_40cm_4_scaffold_57_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24562..25377)
DNA (816bp) protein (272aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3R1_DESIS
13_1_40cm_4_scaffold_57_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25370..25798)
DNA (429bp) protein (143aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatim
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5Y7_THEAQ
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_40cm_4_scaffold_57_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25883..27934)
DNA (2052bp) protein (684aa)
Methyl-accepting chemotaxis protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QH5_SYMTH
chemotaxis protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methyl-accepting chemotaxis protein
13_1_40cm_4_scaffold_57_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27931..28770)
DNA (840bp) protein (280aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
13_1_40cm_4_scaffold_57_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28763..30241)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_57_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30238..31857)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A954_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_57_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31917..33113)
DNA (1197bp) protein (399aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
Tryptophan synthase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A955_GEMAT
Tryptophan synthase beta chain
13_1_40cm_4_scaffold_57_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(33133..33927)
DNA (795bp) protein (265aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Indole-3-glycerol phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U2_GEMAT
Indole-3-glycerol phosphate synthase
Displaying items 1-30 of 45 in total

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