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13_1_40cm_4_scaffold_5963

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5963_1
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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1..126
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF29410.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_1_40cm_4_scaffold_5963_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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536..1051
DNA (516bp) protein (172aa)
PrcB C-terminal domain protein
PrcB C-terminal domain protein {ECO:0000313|EMBL:AHG89240.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5963_3
unknown

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1153..1518
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_5963_4
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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1577..2449
DNA (873bp) protein (291aa)
pantoate/beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=GWC2_Nitrospirae_56_14_curated
Pantothenate synthetase id=3065158 bin=GWC2_Nitrospirae-rel_56_14 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
panC; pantoate--beta-alanine ligase
13_1_40cm_4_scaffold_5963_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2555..3052
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_40cm_4_scaffold_5963_6
unknown

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3028..3438
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_5963_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3376..4434)
DNA (1059bp) protein (353aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
hypothetical protein
13_1_40cm_4_scaffold_5963_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4431..5321)
DNA (891bp) protein (297aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_5963_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5376..5825
DNA (450bp) protein (150aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative phosphotransferase system nitrogen regulatory IIA component id=4096128 bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
PTS IIA-like nitrogen-regulatory protein PtsN
13_1_40cm_4_scaffold_5963_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5831..7600
DNA (1770bp) protein (590aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5963_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7612..8562
DNA (951bp) protein (317aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5963_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8564..11134
DNA (2571bp) protein (857aa)
Putative domain HDIG-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPX0_9FIRM
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5963_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11134..12309
DNA (1176bp) protein (392aa)
Transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
13_1_40cm_4_scaffold_5963_14
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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12306..13505
DNA (1200bp) protein (400aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
Putative uncharacterized protein id=4767744 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_5963_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13548..13772
DNA (225bp) protein (75aa)
putative transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
putative transport system kinase
Displaying 15 items

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