ggKbase home page

13_1_40cm_4_scaffold_668

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_668_1
unknown

Not on your lists

2..109
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

112..1326
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative macrolide efflux ABC transporter permease
13_1_40cm_4_scaffold_668_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1449..3722
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_668_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3770..6151
DNA (2382bp) protein (794aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEV6_9SPHI
Putative MetA-pathway of phenol degradation {ECO:0000313|EMBL:CDM64847.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphato
hypothetical protein
13_1_40cm_4_scaffold_668_5
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(6177..7538)
DNA (1362bp) protein (454aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase id=2777873 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
amidohydrolase Tax=GWB1_Bdellovibrionales_55_8_curated
N-ethylammeline chlorohydrolase
13_1_40cm_4_scaffold_668_6
unknown

Not on your lists

comp(7541..8059)
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8087..10150)
DNA (2064bp) protein (688aa)
Protein kinase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21DN0_SACD2
serine/threonine protein kinase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein kinase
13_1_40cm_4_scaffold_668_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10128..10844)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RV6_SOLUE
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_668_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10914..12071
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZE33_TERRK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_668_10
unknown

Not on your lists

comp(12083..12238)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_11
unknown

Not on your lists

comp(12235..12756)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12793..13989
DNA (1197bp) protein (399aa)
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:AHG89758.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_668_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13990..14820)
DNA (831bp) protein (277aa)
D-aminopeptidase DppA n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ85_THEOJ
D-aminopeptidase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
D-aminopeptidase DppA
13_1_40cm_4_scaffold_668_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15245..15829
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB688
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88547.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_668_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15822..16193
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
regulatory protein ArsR
13_1_40cm_4_scaffold_668_16
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16229..16885
DNA (657bp) protein (219aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteri
Isoprenyl transferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPX1_METNO
13_1_40cm_4_scaffold_668_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17381..18391
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L49_SYMTH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_4_scaffold_668_18
unknown

Not on your lists

18388..19062
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19088..19888
DNA (801bp) protein (267aa)
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PhzF family phenazine biosynthesis protein
13_1_40cm_4_scaffold_668_20
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

20468..20809
DNA (342bp) protein (114aa)
ABC transporter related {ECO:0000313|EMBL:ABQ92948.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein
13_1_40cm_4_scaffold_668_21
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20806..21615
DNA (810bp) protein (270aa)
Putative ABC-type transport system, permease component n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8T3_UNCMA
putative ABC-type transport system, permease component
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:CAJ35210.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;"
13_1_40cm_4_scaffold_668_22
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21706..22140
DNA (435bp) protein (145aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ49_METH6
Polyketide cyclase {ECO:0000313|EMBL:KIF19288.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
Activator of Hsp90 ATPase 1 family protein
13_1_40cm_4_scaffold_668_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22137..23048
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PPP1_MEIRD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_668_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23127..25895)
DNA (2769bp) protein (923aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME35_RHOM4
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Outer membrane receptor protein
13_1_40cm_4_scaffold_668_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25892..26956)
DNA (1065bp) protein (355aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_668_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27091..29061
DNA (1971bp) protein (657aa)
Peptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME75_RHOM4
peptidase
Peptidase {ECO:0000313|EMBL:ACY47299.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_1_40cm_4_scaffold_668_27
unknown

Not on your lists

comp(29113..29532)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_28
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(29529..31556)
DNA (2028bp) protein (676aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=GWA2_Ignavibacteria_54_16_curated
dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=24432021 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9, prolyl oligopeptidase active site region
13_1_40cm_4_scaffold_668_29
unknown

Not on your lists

comp(31591..31848)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_668_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

31947..32942
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILV1_ANADE
Displaying items 1-30 of 37 in total

View Taxonomy