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13_1_40cm_4_scaffold_648

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_648_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..865)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036781DA
ASPIC/UnbV domain protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG89290.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_648_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2694..4286
DNA (1593bp) protein (531aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8I0_GEMAT
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89756.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_648_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4302..5678
DNA (1377bp) protein (459aa)
Membrane or secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T5_GRAFK
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_648_4
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(5754..6203)
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KER09872.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
13_1_40cm_4_scaffold_648_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6305..7078
DNA (774bp) protein (258aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A9_GEMAT
hypothetical membrane protein; K06872 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF477
13_1_40cm_4_scaffold_648_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7081..7791
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_648_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8010..8585
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37771.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_648_8
unknown

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comp(9397..9642)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_648_9
unknown

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comp(10447..10698)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_648_10
unknown

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comp(10756..11028)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_4_scaffold_648_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12073..13284
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_648_12
unknown

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comp(13340..13792)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_4_scaffold_648_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14019..14480
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RagB/SusD domain-containing protein
13_1_40cm_4_scaffold_648_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15009..15845
DNA (837bp) protein (279aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_648_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15975..16913)
DNA (939bp) protein (313aa)
Metalloendopeptidase-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M23 id=7201700 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
yebA2; M23 peptidase domain-containing protein
13_1_40cm_4_scaffold_648_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(17116..18660)
DNA (1545bp) protein (515aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B6_GEMAT
13_1_40cm_4_scaffold_648_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18653..19516)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
PSP1 domain protein
13_1_40cm_4_scaffold_648_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19518..20477)
DNA (960bp) protein (320aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACCA_GEMAT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
13_1_40cm_4_scaffold_648_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20481..24014)
DNA (3534bp) protein (1178aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B9_GEMAT
DNA polymerase III, alpha subunit
13_1_40cm_4_scaffold_648_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24019..24594)
DNA (576bp) protein (192aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU68_RUBXD
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubr
13_1_40cm_4_scaffold_648_21
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24694..26040
DNA (1347bp) protein (449aa)
hypothetical protein, partial n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B72EC4
putative transporter
Putative transporter {ECO:0000313|EMBL:AFE05638.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corall
13_1_40cm_4_scaffold_648_22
unknown

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25979..26287
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 22 items

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