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13_1_40cm_4_scaffold_724

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_724_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..639)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNH3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33320.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_724_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(636..1793)
DNA (1158bp) protein (386aa)
putative oxidoreductase; K15736 L-2-hydroxyglutarate oxidase [EC:1.1.3.-] Tax=RBG_13_Acidobacteria_68_16_curated
Putative oxidoreductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5S8_ANATU id=5224033 bin=16ft_combo_ws3_JS1 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hydroxyglutarate oxidase
13_1_40cm_4_scaffold_724_3
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1838..2770)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036D3E76
Polysaccharide deacetylase
Uncharacterized protein {ECO:0000313|EMBL:AJE22969.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_1_40cm_4_scaffold_724_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2825..3673)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI00036EC2A8
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polysaccharide deacetylase
13_1_40cm_4_scaffold_724_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3760..4359)
DNA (600bp) protein (200aa)
epsP; low molecular weight protein-tyrosine-phosphatase epsP (EC:3.1.3.48)
EpsP n=2 Tax=Ralstonia solanacearum RepID=A3RXW0_RALSL
Probable low molecular weight protein-tyrosine-phosphatase epsp {ECO:0000313|EMBL:CEJ17347.1}; Protein tyrosine phosphatase {ECO:0000313|EMBL:KFX28843.1}; TaxID=305 species="Bacteria; Proteobacteria;
13_1_40cm_4_scaffold_724_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4356..4904)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_724_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4853..6175)
DNA (1323bp) protein (441aa)
ATPase (EC:3.6.-.-); K07478 putative ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C6_GEMAT
MgsA AAA+ ATPase domain-containing protein
13_1_40cm_4_scaffold_724_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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6387..6743
DNA (357bp) protein (119aa)
30S ribosomal protein S23 n=1 Tax=Hippea alviniae RepID=UPI0003B4E5EA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
S23 ribosomal protein
13_1_40cm_4_scaffold_724_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6858..7187)
DNA (330bp) protein (110aa)
Zinc/iron transporter n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHK3_9BACT
metal cation transporter, ZIP family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
zinc/iron permease
13_1_40cm_4_scaffold_724_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7553..8743)
DNA (1191bp) protein (397aa)
tRNA nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C8_GEMAT
tRNA nucleotidyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polynucleotide adenylyltransferase region
13_1_40cm_4_scaffold_724_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8740..9501)
DNA (762bp) protein (254aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C9_GEMAT
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_724_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9498..10061)
DNA (564bp) protein (188aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoheptose isomerase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BSZ6_9FIRM
Phosphoheptose isomerase
13_1_40cm_4_scaffold_724_13
CG_Micra_04, Micraarchaeota, Archaea

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comp(10088..10831)
DNA (744bp) protein (248aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=CG_Micra_04
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
geranylgeranylglyceryl phosphate synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B54552
13_1_40cm_4_scaffold_724_14
unknown

Not on your lists

comp(10828..11163)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_724_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11160..13790)
DNA (2631bp) protein (877aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D2_GEMAT
Alanine-tRNA ligase, eukaryota/bacteria
13_1_40cm_4_scaffold_724_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13841..14470)
DNA (630bp) protein (210aa)
Regulatory protein RecX n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLM0_SORCE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_724_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(14470..15504)
DNA (1035bp) protein (345aa)
Protein RecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D4_GEMAT
recA; RecA protein; K03553 recombination protein RecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein recA
13_1_40cm_4_scaffold_724_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15570..15962)
DNA (393bp) protein (131aa)
UPF0102 protein GAU_1918 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D5_GEMAT
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0102 protein yraN
13_1_40cm_4_scaffold_724_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(16100..18301)
DNA (2202bp) protein (734aa)
Cell division protein FtsK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D8_GEMAT
ftsK; cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ftsK; cell division protein FtsK
13_1_40cm_4_scaffold_724_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18298..19017)
DNA (720bp) protein (240aa)
2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative 2-phosphosulfolactate phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D9_GEMAT
2-phosphosulfolactate phosphatase
13_1_40cm_4_scaffold_724_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19014..20372)
DNA (1359bp) protein (453aa)
accC; acetyl-CoA carboxylase biotin carboxylase (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E0_GEMAT
acetyl-CoA carboxylase, biotin carboxylase
13_1_40cm_4_scaffold_724_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20372..21538)
DNA (1167bp) protein (389aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E1_GEMAT
pilT; twitching mobility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pilT; twitching mobility protein
13_1_40cm_4_scaffold_724_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21531..22028)
DNA (498bp) protein (166aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E2_GEMAT
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
13_1_40cm_4_scaffold_724_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(22097..23191)
DNA (1095bp) protein (365aa)
Putative Xaa-Pro dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E3_GEMAT
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AHG91072.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_724_25
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23181..23627)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9PBF0_CYAGP
3-dehydroquinate dehydratase
13_1_40cm_4_scaffold_724_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23644..25308)
DNA (1665bp) protein (555aa)
Tetratricopeptide repeat-containing protein
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:AHG91074.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=7200674 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_4_scaffold_724_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25457..27304
DNA (1848bp) protein (616aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E6_GEMAT
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_724_28
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(27317..27541)
DNA (225bp) protein (75aa)
Sec-independent protein translocase protein TatA n=1 Tax=Centipeda periodontii DSM 2778 RepID=F5RIJ7_9FIRM
putative twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB Tax=CG_Delta_03
sec-independent translocation protein mttA/Hcf106
13_1_40cm_4_scaffold_724_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27545..27784)
DNA (240bp) protein (80aa)
Sec-independent protein translocase protein TatA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E7_GEMAT
Sec-independent protein translocase tatA/E-like protein; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Gemmatimonadetes_66_8_curated
Sec-independent protein translocase protein tatA/E-like protein
13_1_40cm_4_scaffold_724_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27795..28067)
DNA (273bp) protein (91aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E8_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
Displaying items 1-30 of 50 in total

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