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13_1_40cm_4_scaffold_7360

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7360_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..580
DNA (579bp) protein (193aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CA59_MYXFH
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
potassium uptake protein
13_1_40cm_4_scaffold_7360_2
RLO_PLX_64_10, Bacteria

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677..2782
DNA (2106bp) protein (702aa)
acetate--CoA ligase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Acetyl-coenzyme A synthetase id=4380013 bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
13_1_40cm_4_scaffold_7360_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3008..3337
DNA (330bp) protein (110aa)
anti-anti-sigma factor family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_7360_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3355..3723
DNA (369bp) protein (123aa)
Response regulator DrrA n=2 Tax=Salinibacter ruber RepID=D5HC73_SALRM id=5225675 bin=16ft_combo_ws3_JS1 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
winged helix family two component transcriptional regulator
13_1_40cm_4_scaffold_7360_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3710..4396
DNA (687bp) protein (229aa)
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein id=14630965 bin=bin9_gal15 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin9_gal15 organism_group=GAL15
cytochrome ABC transporter ATP-binding component
13_1_40cm_4_scaffold_7360_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4389..5069
DNA (681bp) protein (227aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_4_scaffold_7360_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5066..5752
DNA (687bp) protein (229aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_4_scaffold_7360_8
CG_Arma_01, Armatimonadetes, Bacteria

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6463..7299
DNA (837bp) protein (279aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=CG_Arma_01
Uroporphyrin-III C-methyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSI5_9FIRM
uroporphyrinogen-III C-methyltransferase
13_1_40cm_4_scaffold_7360_9
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7296..8216
DNA (921bp) protein (307aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R3S6_PIRSD
13_1_40cm_4_scaffold_7360_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8304..9179
DNA (876bp) protein (292aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadace
Delta-aminolevulinic acid dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA37_GEMAT
13_1_40cm_4_scaffold_7360_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9277..9972)
DNA (696bp) protein (232aa)
MIP family channel protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
MIP family channel protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
major intrinsic protein
13_1_40cm_4_scaffold_7360_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10021..11262)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
13_1_40cm_4_scaffold_7360_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11262..11771)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Polyketide cyclase/dehydrase
13_1_40cm_4_scaffold_7360_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11765..12472)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA33_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methyltransferase type 11
Displaying 14 items

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