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13_1_40cm_4_scaffold_766

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_766_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(127..1800)
DNA (1674bp) protein (558aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_4_scaffold_766_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(1892..2824)
DNA (933bp) protein (311aa)
Putative Glycoside hydrolase, family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFX8_9CHLR
Putative Glycoside hydrolase, family 5 {ECO:0000313|EMBL:CCF83590.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrol
cellulose-binding family II protein
13_1_40cm_4_scaffold_766_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(3054..4145)
DNA (1092bp) protein (364aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHC5_CHLTF
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain-containing protein
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein {ECO:0000313|EMBL:AEP12188.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision
13_1_40cm_4_scaffold_766_4
unknown

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4430..4693
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_766_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4785..5705
DNA (921bp) protein (307aa)
pirin; K06911 Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein; K06911 id=24497726 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pirin
13_1_40cm_4_scaffold_766_6
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(5806..6714)
DNA (909bp) protein (303aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
13_1_40cm_4_scaffold_766_7
unknown

Not on your lists

comp(6762..7298)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_4_scaffold_766_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7431..8531
DNA (1101bp) protein (367aa)
methionine sulfoxide reductase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B630EE
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase Tax=CSP1_2_Dadabacteria
peptide methionine sulfoxide reductase, S-isomer-specific domain and R-isomer-specific domain-containing
13_1_40cm_4_scaffold_766_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8597..9589)
DNA (993bp) protein (331aa)
transcriptional regulator CadC Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_766_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9550..10539)
DNA (990bp) protein (330aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE65_GEMAT
13_1_40cm_4_scaffold_766_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10609..11775
DNA (1167bp) protein (389aa)
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=mine drainage metagenome RepID=E6PPL8_9ZZZZ
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_766_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11788..12210)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPP3_HYPDA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_766_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12320..13651)
DNA (1332bp) protein (444aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY5_GEMAT
protein of unknown function DUF445
Uncharacterized protein {ECO:0000313|EMBL:AHG91366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_766_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13711..14958
DNA (1248bp) protein (416aa)
Glutamate-aspartate carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A970_GEMAT
gltP; glutamate-aspartate carrier protein
Glutamate-aspartate carrier protein {ECO:0000313|EMBL:BAH39047.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
13_1_40cm_4_scaffold_766_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14955..15836
DNA (882bp) protein (294aa)
NmrA family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V1_SOLUE
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:AHG89765.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_766_16
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15859..16278)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMV1_METH6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET64516.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
13_1_40cm_4_scaffold_766_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16458..17147)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD1_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT74371.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
13_1_40cm_4_scaffold_766_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17407..17961)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D7749
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG88849.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_766_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18082..18546
DNA (465bp) protein (155aa)
Peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:AIF83221.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AIF83221.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitros
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000364C80B
13_1_40cm_4_scaffold_766_20
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18543..19079
DNA (537bp) protein (179aa)
DSBA oxidoreductase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1B3_ANAVT
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABA25230.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
13_1_40cm_4_scaffold_766_21
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(19076..19681)
DNA (606bp) protein (202aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B091_HERA2
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABX05200.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosip
13_1_40cm_4_scaffold_766_22
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(19736..20143)
DNA (408bp) protein (136aa)
transmembrane_regions 17..39 Tax=RBG_16_KB1_OP1_55_9_curated
transmembrane_regions 17..39 id=83838 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein; K15977 putative oxidoreductase
13_1_40cm_4_scaffold_766_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20262..21920
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL9_GEMAT
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG92073.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_766_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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22755..23237
DNA (483bp) protein (161aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QJ7_SOLUE
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid permease-associated region
13_1_40cm_4_scaffold_766_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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23234..24214
DNA (981bp) protein (327aa)
amidohydrolase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Amidohydrolase 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QJ8_SOLUE
amidohydrolase 2
13_1_40cm_4_scaffold_766_26
unknown

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24247..24411
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_766_27
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

24626..25870
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV59_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
13_1_40cm_4_scaffold_766_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25964..27820
DNA (1857bp) protein (619aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_4_scaffold_766_29
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27817..29184
DNA (1368bp) protein (456aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
diguanylate cyclase
13_1_40cm_4_scaffold_766_30
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

29186..30334
DNA (1149bp) protein (383aa)
Alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=RBG_13_Aminicenantes_63_10_curated
Alpha-galactosidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR22_KORVE
alpha-galactosidase
Displaying items 1-30 of 56 in total

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