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13_1_40cm_4_scaffold_8804

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8804_1
unknown

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1..969
DNA (969bp) protein (323aa)

This feature has no annotations

13_1_40cm_4_scaffold_8804_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1004..2362)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_8804_3
uncultured myxobacterium HF0200_05J13, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2676..3152)
DNA (477bp) protein (159aa)
FOG: CheY-like receiver n=1 Tax=uncultured myxobacterium HF0200_05J13 RepID=E7C3L8_9DELT
FOG: CheY-like receiver {ECO:0000313|EMBL:ADI22042.1}; TaxID=723557 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; environmental samples.;" source="uncultured myxobacterium HF02
putative two-component system response regulator
13_1_40cm_4_scaffold_8804_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3399..4157)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 IPR1_THEET">RepID=C7IPR1_THEET
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_8804_5
GWC2_SYX_53_9_curated, Bacteria

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comp(4158..5852)
DNA (1695bp) protein (565aa)
Fe-S cluster domain protein n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GFC5_SPITZ
putative PAS/PAC sensor protein Tax=GWC2_SYX_53_9_curated
Fe-S cluster domain-containing protein
13_1_40cm_4_scaffold_8804_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5963..7483)
DNA (1521bp) protein (507aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD4_GEMAT
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sigma-54 factor interaction domain-containing protein
13_1_40cm_4_scaffold_8804_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8014..9126)
DNA (1113bp) protein (371aa)
gcvT; aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD5_GEMAT
13_1_40cm_4_scaffold_8804_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9179..10078)
DNA (900bp) protein (300aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ornithine carbamoyltransferase, catabolic n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD7_GEMAT
Ornithine carbamoyltransferase
13_1_40cm_4_scaffold_8804_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10151..11629)
DNA (1479bp) protein (493aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD9_GEMAT
hslU; ATP-dependent Hsl protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATP-dependent hsl protease ATP-binding subunit hslU
13_1_40cm_4_scaffold_8804_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11632..12108)
DNA (477bp) protein (159aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=861299 specie
ATP-dependent protease subunit HslV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HSLV_GEMAT
ATP-dependent protease hslV
13_1_40cm_4_scaffold_8804_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12210..13043)
DNA (834bp) protein (278aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE3_GEMAT
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RBG_16_Gemmatimonadetes_66_8_curated
xerC; tyrosine recombinase XerC
13_1_40cm_4_scaffold_8804_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(13061..14368)
DNA (1308bp) protein (436aa)
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_c
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE4_GEMAT
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid
13_1_40cm_4_scaffold_8804_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(14386..16761)
DNA (2376bp) protein (792aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
13_1_40cm_4_scaffold_8804_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16798..17316)
DNA (519bp) protein (173aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT
13_1_40cm_4_scaffold_8804_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17313..18455)
DNA (1143bp) protein (381aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE8_GEMAT
13_1_40cm_4_scaffold_8804_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18546..18812)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
Displaying 16 items

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