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13_1_40cm_4_scaffold_8956

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8956_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..2027
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036D001C
Ig domain protein group 1 domain protein
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:AHG90461.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_8956_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2057..2704)
DNA (648bp) protein (216aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_8956_3
unknown

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comp(2863..2994)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_8956_4
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3246..4274)
DNA (1029bp) protein (343aa)
von Willebrand factor type A n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CS67_TRURR
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ADI13599.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Trueper
13_1_40cm_4_scaffold_8956_trna_1
unknown

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4948..5020
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_8956_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5481..7265
DNA (1785bp) protein (595aa)
TonB-dependent receptor plug n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB6_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:EEF60377.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
TonB-dependent receptor, plug
13_1_40cm_4_scaffold_8956_6

Not on your lists

7599..7811
DNA (213bp) protein (71aa)
Putative transmembrane protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJP2_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:AIA11042.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transmembrane protein
13_1_40cm_4_scaffold_8956_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7813..9216
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;
Phytochrome, two-component sensor histidine kinase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWC4_9BACT
integral membrane sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_8956_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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9203..9649
DNA (447bp) protein (149aa)
Response regulator rcp1 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EN76_9CHLR
Two-component response regulator contains FOG: CheY-like receiver {ECO:0000313|EMBL:GAN33598.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Bro
response regulator receiver
13_1_40cm_4_scaffold_8956_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9659..11626
DNA (1968bp) protein (656aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000310D1D4
multi-sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_48_10_curated
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_8956_10
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11623..12810
DNA (1188bp) protein (396aa)
Multi-sensor Hybrid Histidine Kinase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VD2_STIAD
PAS domain S-box Tax=GWD2_Desulfuromonadales_61_12_curated
sensor protein
13_1_40cm_4_scaffold_8956_11
unknown

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comp(12834..13481)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_4_scaffold_8956_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13632..14369
DNA (738bp) protein (246aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARS3_PELPD id=5224960 bin=16ft_combo_ws3_JS1 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
atoC6; sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
sigma-54 factor interaction domain-containing protein
Displaying 13 items

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