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13_1_40cm_4_scaffold_943

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_943_1
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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424..1506
DNA (1083bp) protein (361aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P497_9FIRM
Glycerate kinase {ECO:0000313|EMBL:EKP95875.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaeroba
13_1_40cm_4_scaffold_943_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1531..2868
DNA (1338bp) protein (446aa)
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC9_9BACT
13_1_40cm_4_scaffold_943_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2964..3656
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTI8_TRURR
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_943_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3649..3945
DNA (297bp) protein (99aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_943_5
unknown

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3942..4874
DNA (933bp) protein (311aa)

This feature has no annotations

13_1_40cm_4_scaffold_943_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4936..5400)
DNA (465bp) protein (155aa)
ATP-independent chaperone, alpha-crystallin/Hsp20 family n=2 Tax=Geobacter sulfurreducens RepID=D7AF92_GEOSK
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hspA-1; ATP-independent chaperone
13_1_40cm_4_scaffold_943_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5584..6684
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37189.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_943_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6681..6965
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_943_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6962..7234
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U6_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_943_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7231..7503
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_943_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7525..8463
DNA (939bp) protein (313aa)
Histone deacetylase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V3_GEMAT
histone deacetylase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Histone deacetylase domain protein
13_1_40cm_4_scaffold_943_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8517..9545
DNA (1029bp) protein (343aa)
Putative dipeptide epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V6_GEMAT
putative dipeptide epimerase
Putative dipeptide epimerase {ECO:0000313|EMBL:BAH37966.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
13_1_40cm_4_scaffold_943_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9542..11809
DNA (2268bp) protein (756aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=861299 species="Bacteria; G
Primosomal protein N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V7_GEMAT
primosomal protein N
13_1_40cm_4_scaffold_943_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11921..13045
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TZ49_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFE68100.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_4_scaffold_943_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13006..13407
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_943_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13397..13861
DNA (465bp) protein (155aa)
Fur family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W1_GEMAT
Fur family transcriptional regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Fur family transcriptional regulator
13_1_40cm_4_scaffold_943_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13825..14427
DNA (603bp) protein (201aa)
pdaD; pyruvoyl-dependent arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvoyl-dependent arginine decarboxylase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5654E
pdaD; pyruvoyl-dependent arginine decarboxylase
13_1_40cm_4_scaffold_943_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14474..15163
DNA (690bp) protein (230aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-); K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
13_1_40cm_4_scaffold_943_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15229..15987
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_943_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15993..17579)
DNA (1587bp) protein (529aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
gamma-glutamyltransferase
13_1_40cm_4_scaffold_943_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17863..18795
DNA (933bp) protein (311aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
N-acetylmuramic acid 6-phosphate etherase
13_1_40cm_4_scaffold_943_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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18792..19913
DNA (1122bp) protein (374aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W8_GEMAT
Anhydro-N-acetylmuramic acid kinase
13_1_40cm_4_scaffold_943_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19910..21346
DNA (1437bp) protein (479aa)
glycosidase (EC:3.2.1.-); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W9_GEMAT
glycoside hydrolase family 3 domain protein
13_1_40cm_4_scaffold_943_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21451..22917)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEE6_GEMAT
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_943_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22914..23945)
DNA (1032bp) protein (344aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X0_GEMAT
protein phosphatase 2C domain protein
13_1_40cm_4_scaffold_943_26
unknown

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comp(23949..24179)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_4_scaffold_943_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(24211..24939)
DNA (729bp) protein (243aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Serine/threonine protein kinase PrkC, regulator of stationary phase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PCR9_9DELT
protein kinase
Displaying 27 items

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