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13_1_40cm_4_scaffold_1922_29

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 27879..28916

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 330.0
  • Bit_score: 364
  • Evalue 2.10e-97
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 331.0
  • Bit_score: 275
  • Evalue 9.20e-71
pseudouridine synthase, RluA family similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 323.0
  • Bit_score: 279
  • Evalue 1.80e-72

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1038
GTGACGCGGGCCGCCACCTCACCCCTCCCCGATCGGCTCGCCTTCTGTGTCGCCGTGCCCCTCACCGAGCGACTCGACCGCTTCCTGGCCGACCAGCTCGCCCTGTCCCGCACGCAGGCCGCCCGTCTCATCGCCGATAAGCTCGTCACCACCGCCGGCAAGCCGCTCCGTGCCTCGGCGTGCCTGGAGCGGGGCGCCGAGCTCACCCTCACCTTCCCGGCCGCAGCCCCGCCGCGCACCTATGCGCCCGCCACGGCCGACCTGCGGTTCGTCTACGAGGACGACCACCTCGCAGTGCTCGACAAGCCGGCCGGGCTCGTAGTCCACCCGGGGCCGGGCCACTGGGACGACTCGCTGGTCAACGTGCTGGTGGGGCGGGGCACCGAGTTGTCGCAGGGGGCGGAAGCCGGACGGCCCGGCATCGTGCACCGGCTGGACCGCGACACCTCGGGGCTGCTCATCGTCGCCAAGTCCGACCTCGCGCACCGCGGACTCGCCCGCGCGATCGAGCGCCGCCAGGTCGAGCGCGTCTACGCGGCGGTGGCGTGGGGCCACTTCCCCCAGAGCCCGGTCGAGATCGAGGCCCCGATCGCGCGCCACGCCGCCGACCGCAAGCGCATGAGCGTGCGCGCCGGCGGCCGCCACGCCGTCACCTACGTGGCCGTCGTTGCACGGTTCGCCCTCGTCGACCTGGTGCGCGTTCGTCTGGGGACGGGCCGCACACACCAGATCCGCGTCCACCTCGCGCACGTGGGCCATCCGGTGGTAGGCGACCGCGACTACGCGTTCGGCGGGAGCCGCCGCGTCACGCCGTCGGCGCGGCAGGCGGCCGAGCGGCTCGAGACGCTCGCGCCGCGCCAGCTGCTGCACGCGGCTGCGCTGTCGTTCATCCATCCGGTCACGGGCGCGCGCCTCGCACTGCAGTCGGATTGGCCACCCGATTTGCGGCCCGCGCTCGCCGATTTGGCAGGCGATCCAAACTTGCTTGTGGAACGCAACCCCTTGCAGTATCTTGGCTTCTTTGCATCGGATGGCTGA
PROTEIN sequence
Length: 346
VTRAATSPLPDRLAFCVAVPLTERLDRFLADQLALSRTQAARLIADKLVTTAGKPLRASACLERGAELTLTFPAAAPPRTYAPATADLRFVYEDDHLAVLDKPAGLVVHPGPGHWDDSLVNVLVGRGTELSQGAEAGRPGIVHRLDRDTSGLLIVAKSDLAHRGLARAIERRQVERVYAAVAWGHFPQSPVEIEAPIARHAADRKRMSVRAGGRHAVTYVAVVARFALVDLVRVRLGTGRTHQIRVHLAHVGHPVVGDRDYAFGGSRRVTPSARQAAERLETLAPRQLLHAAALSFIHPVTGARLALQSDWPPDLRPALADLAGDPNLLVERNPLQYLGFFASDG*