ggKbase home page

13_1_40cm_4_scaffold_2228_25

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(23893..24390)

Top 3 Functional Annotations

Value Algorithm Source
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 165.0
  • Bit_score: 167
  • Evalue 1.40e-38
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A895_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 158.0
  • Bit_score: 132
  • Evalue 3.60e-28
cheD; chemotaxis protein CheD similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 158.0
  • Bit_score: 132
  • Evalue 1.00e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGCGTGCCCGCGCCGCCGGAGACGATCGTCAAGGTCGCGGACTGGGCCGCGGCGCGGACCGACGGCGTGATCGTGACGCTCGGGCTCGGCTCCTGCGTCGCGATCATGCTGCACGATCTCCGAGCCGGTGCCGGCGCCATGGCGCACGTGCTCCTCCCCTCCAAGAGCCTCGCGCGCGACATCAGCAACCCGGCGAAGTTCCCCGAGACCGCGGTGCCGTTTCTGATCGAGCGCCTCAAGGCGCTGGGCGCCGACCCACGGCGACTGGTCGCGAAGCTGGCGGGCGGGGCGAGCATGTTCGCCCAGCTCATGACGCCCGCCTCGATTCAGATGGGGGAGCGCAACGTCGTCGCGGCCCGGAAGGCGCTTCGCGCCGCCGGCATCCCCGTCGCGGGCGAGGCCGTCGGCGGCGACAAGGGCCGCTCGGTCCGGTTCCACGTGGCCGACGGGCGCGTCGAGATCCGCTCGGTGGGGGCCGATGCCGTCGTCATCTGA
PROTEIN sequence
Length: 166
MSVPAPPETIVKVADWAAARTDGVIVTLGLGSCVAIMLHDLRAGAGAMAHVLLPSKSLARDISNPAKFPETAVPFLIERLKALGADPRRLVAKLAGGASMFAQLMTPASIQMGERNVVAARKALRAAGIPVAGEAVGGDKGRSVRFHVADGRVEIRSVGADAVVI*