ggKbase home page

13_1_40cm_4_scaffold_4208_7

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 2893..5559

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 764.0
  • Bit_score: 1218
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 786.0
  • Bit_score: 1089
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 796.0
  • Bit_score: 1117
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2667
ATGACGAAGACGCTGCCGGTGCTGTCGTTCGCCAAGCTAGAGACGGGCATGCCGATGCCCCATCTCCTCGACATCCAGACGCGGGCGTTCCAGTCCTTGCTGCAGCCGGATGGCAAGAACGCCGAGCGCTCGGACGTCGGCCTGGAGCGGGTGTTCAAGGACCTGTTCCCGATCCAGGACGTGAACGGCAATTACTCGCTGGAGTTCGTGAAGTACGCGCTGGGCGAGCCGAAGTACACCGTGGAGGAGTGCATCGAGCGGGACATGACCTACTCGGTGCCGCTCAAGGCCACGCTACAGCTGGTGGTGATGGAGGAGGTTGGGGAGACGACGAAGACGAAGCGGCCCAAGAACATCATCGAGAAGGAAGTCTACTTGGGCGAGCTGCCGATCCTCACGCCGCTGGGCACGTTCGTCATCAACGGCGCCGAGCGCGTCATCGTGTCGCAGCTGCATCGCTCGCCGGGCGTGGTGTTCGAGGAGAGCATCCACCCCAACGGCCAGCGCCTGTTCTCGGCGCGGATCATCCCGTTCCGGGGCTCGTGGGTCGAATTCACGATCGACATCCACGACGTGATCTACGTCCATATCGACAAAAAGAAGAAGTTCCCGGCTACCGCCCTGCTGCGCGCCTTCGGCTACGGGACCAACGCCGACATCCTCTCGCTCTTCTACGCGACCAAGGAGCTCGACATCACGGGCAAGCTCGAGGGCCGCGCCCAGAAGCGTGAGGTGCTCGGCACCCTACTGGCGGTGGACGTCCCCGACCCCGAGAACAAGAAGGGTGAGCCGTTGGGCCGTGTGGGCGACGAGTTGACACTCGAGAAGTTCAACACGTTCCGCCGGGCCGGCATCCCCAAGGTCAAGGTGTTCGCGGGCTACACCGCGCTGGGCCTACGGGACGAGGCGCAGCCGACCACCACGCAGCAACAGCAGAGCAAGCACATTCTGGCCTTCGATGTGGCCGACCCGGAAACGGGGGAGGTGCTGGCCGAGGGCAGCCGCGAGCTCAGCGACGCGCTGAAGAAGCGGCTGCTCAAGGCGGGGCTCACCAAGGTGGAGGTGCTGTTGCCGCCGGGGCGGAGCGAGTCGCCGCTGATCAAGAACACGCTGGTCAAGGACCCGACCCACAGCGAGGCCGAAGCCCTGGAGCAGATCTACGCGCTGCTGCGGCCGGGCGAGGCGCCCAACCTGGAGACCGCGCGCCAGGCGCTGGAGCGGCTGTTCTTCCACCCCAAGCGCTACGATCTGGGGCGGGTGGGCCGCTACAAGATCAACCAGCGGCTCAAGGTGAATGTCGCCAAGGACCACACGGTCCTGACGGAAGAGGATTTCATCGCGATCATCCGCTACTTGATCGAGCTCTCCGACGGGCGCGGCTACACCGACGACATCGACCACCTCGGCAACCGGCGCGTGCGCTCGGTGGGCGAGCTGATCGCCAACCAGTTCTCGGTGGGCCTGTCGCGCATGGCGCGGCTCATCAAGGAGCGCATGAGCATCAACAATGATCCCGAGCGGATCACCCTGGACGACCTCGTGAACGCCCGGACCGTGAGCGCGGTGATCCAGGCGTTCTTCGGCAGCTCGCAGCTGTCGCAGTTTATGGACCAGACGAACCCGCTGGCCGAGCTGACCCACAAGCGCCGGCTGTCGGCGCTCGGGCCGGGCGGCCTCACGCGCGAGCGGGCGGGGTTCGAGGTTCGCGACGTGCACTACAGCCAGTACGGCCGGATGTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGTCTGATCACGAGCCTGTCCTGCTACGCCCGCGTCAACGACCTCGGCTTCATCGAGACGCCCTACCGCATGGTGAAGGACGGCCGGGTCAGCGACCAGATCCGCTGGCTGTCGGCCAGTGAGGAAGAGGAGTATGCGGTGGCCCAGGCGAACGCGCGCCTCACCGAGGACGGCCGCTTCGCCGACGAGCTGGTGCTGTGCCGCAAGCGGGACGACTATCCGCTGCTGGCGCCCGGCCGCATCGACTTCATGGACGTGGCGCCCGAGCAGCTGGTGTCGATCGCGGCGGCGCTGATCCCGTTCTTGGAGCACGACGACGCCAACCGCGCGCTCATGGGCTCGAACATGCAGCGCCAATCGGTGCCCCTGCTGTTCCCCCAGGCCCCCCTGGTCGGGACCGGGCTGGAAGAGCGGGTGGCCCGGGACTCGGGCGCCGTCGTCATCGCCCGACGGGCCGGGGTGGTGCAGCGCGTCACGGCCGATGAAATCATCGTCGACACCGGCGACGAGGAGCGCCGGGGAAGCGCGCCTCAAGCAGCACGACCGCTACCGCCTCAAGAAGTTCTGGCGCACCAACCAGGACACGGCCACCAACCAGCGGCCCCTGGTGCACGTGGGGCAGCGGGTGAAGGCGGGCCAGATCGTGGCCGACGGCGCCGGGACCGAGCGCGGCGAGCTGGCCCTGGGCGCCAACGTCACGGTGGCGTTCATGCCCTGGTACGGGCACAACTTCGAGGACGCCATCATCCTCTCGGAGCGCCTGGTGAAGGACGACGTCTACTCGTCGATCCATATCCAGGAGCTGGAGCTCCACGTCCGCGACACCAAGCGCGGCCGCGAAGAGATCACACGCGAGATCCCGAACGTTGCCGAGGAGTCGCTGGTCGACCTCGATGA
PROTEIN sequence
Length: 889
MTKTLPVLSFAKLETGMPMPHLLDIQTRAFQSLLQPDGKNAERSDVGLERVFKDLFPIQDVNGNYSLEFVKYALGEPKYTVEECIERDMTYSVPLKATLQLVVMEEVGETTKTKRPKNIIEKEVYLGELPILTPLGTFVINGAERVIVSQLHRSPGVVFEESIHPNGQRLFSARIIPFRGSWVEFTIDIHDVIYVHIDKKKKFPATALLRAFGYGTNADILSLFYATKELDITGKLEGRAQKREVLGTLLAVDVPDPENKKGEPLGRVGDELTLEKFNTFRRAGIPKVKVFAGYTALGLRDEAQPTTTQQQQSKHILAFDVADPETGEVLAEGSRELSDALKKRLLKAGLTKVEVLLPPGRSESPLIKNTLVKDPTHSEAEALEQIYALLRPGEAPNLETARQALERLFFHPKRYDLGRVGRYKINQRLKVNVAKDHTVLTEEDFIAIIRYLIELSDGRGYTDDIDHLGNRRVRSVGELIANQFSVGLSRMARLIKERMSINNDPERITLDDLVNARTVSAVIQAFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHYSQYGRMCPIETPEGPNIGLITSLSCYARVNDLGFIETPYRMVKDGRVSDQIRWLSASEEEEYAVAQANARLTEDGRFADELVLCRKRDDYPLLAPGRIDFMDVAPEQLVSIAAALIPFLEHDDANRALMGSNMQRQSVPLLFPQAPLVGTGLEERVARDSGAVVIARRAGVVQRVTADEIIVDTGDEERRGSAPQAARPLPPQEVLAHQPGHGHQPAAPGARGAAGEGGPDRGRRRRDRARRAGPGRQRHGGVHALVRAQLRGRHHPLGAPGEGRRLLVDPYPGAGAPRPRHQARPRRDHTRDPERCRGVAGRPR*