ggKbase home page

13_1_40cm_4_scaffold_4208_8

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 5588..7378

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 598.0
  • Bit_score: 862
  • Evalue 3.30e-247
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 596.0
  • Bit_score: 776
  • Evalue 4.80e-222
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 596.0
  • Bit_score: 775
  • Evalue 3.80e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1791
GTGAAGGCGGGCGACATCCTGGTCGGTAAGATCACACCCAAGGGCGAGACCGAGCTCTCCCCCGAGGAGAAGCTGCTCACGGCGATTTTCGGCGAGAAGGCCAAGGACGTGAAGGACTCCTCGCTCAAGGTGCCGCCCGGCATGGAGGGCGTGGTCATTGACGTCAAGATCTTCTCCCGCATCGAGGACCAGGTGGTCGAGAAGGACCGCGGCGAGCGCATCGGCGAGGTCCGGCGGCTCGAGGTGGACGAAAAGGCGCGCATCACGGAGGCCATGGCCGCCGAGCTGGTCGAGCTGCTGGTGGGCCAGGAGGTGGGGTTGCTGCTGAAGGCGGGGACGGTGGAGGAATACCTCCCGGCCGGCACCAAGCTCACGCGGCCGCAGCTGGCGGAAGTGCGCTTCGCCGACGTGGATCTCAAGACGCTGCGCGTCGCCAACAAAGCGGTGAATGAGAAGATCAAGGCGATGCTCGACGCGGCGACGGGCGAGCGCGCCAAGATCGAGGAGAAGTCCGAGGACCAGATCGACAAGATCCTGCAGCCCGACGAGCTGCCACCGGGCGTCATCCAGCTCGTGAAGGTCTATGTCGCCGAGAAGCGCAAGATCTCAGTGGGCGACAAGATGGCGGGCCGGCACGGCAACAAGGGCATCATCGCGCGCATCGTCCCCGAGGAGGATATGCCGTTCCTCCCGGATGGGACGCCGGTGGACATCGTCCTGAACCCGCTCGGCGTGCCGAGCCGCATGAACGTCGGGCAGATCCTGGAGACCCACCTCGGGTGGGCCGCCAGAATCCTGGGGTTCGAGGCCAAGACGCCCGTCTTCCAAGGCGCCGACGAGACCGAAATCGGCATCCTGGTGCGGTTGGCGGGCTTGACGTGGGCCGCCGAGGCGCTGCGCCTCGCGGTGCGACCGCCGGAAATGGACCCGGAGACGGTGCGCGGCATCACGCAGGACCTGCGGCGGCTGCCGGCCACCAACGGCGGCAAGCCCGACCTGACGCGGGCGGGGATCAGCTTGCTGGCGTCGCGGGCGCTGGGCACGGAGACGCGCGAGGTGTTCCACCGCTTCGAGGATTTCCTGAAGTTCGCCGCGAAGGAGCTGGCGGATCGCGAGCTGGAGCAGCGCCGCCTCGAGCAGGAGACCCACGCGGCGCGACTCGAGGCCGAGGACCTCGCGAAGGCCGACAAAGCGGCGCTCAAGGCGGGGCTCAAGGAGGTCGAGAAGTTCCTCGAGCACGGCAAACCGGCCGAGGTGCTCGAGGCCGTGGGCTATCCGGCGCTGGCAGCGGTGCTCGGCCCGAAGTCGGAGGCCGACCTGGACCAGGCGGTGAGCGAGCTGCTGGCGATCGCCGGGCTGTCGCCGGCGGGCAAGTGCCGACTGCGCGACGGGCGCTCGGGGGAGTTCTTCACCTCCGACGTCACCGTCGGTTCGATCTACATGATGAAGCTGTCGCACCTGGTGGACGACAAGATCCACGCGCGGTCCATCGGGCCCTACTCGTTGGTGACGCAACAGCCGCTCGCCGGTAAGGCGCAGTTCGGCGGCCAGCGCTTCGGGGAGATGGAGGTGTGGGCGCTCGAGGCCTATGGGGCGGCCCATACGCTGCAGGAGATCTTGACCGTGAAGTCGGACGACGTGAACGGTCGCAGCCGCGTGTACGAGGCCATCGTCAAGGGGCAGAACCTGCCGAAACCCGGCATCCCCGAGTCCTTCAACGTGCTGGTGAAGGAACTCCAGGCCCTGGGGTTGAAGGTCACCCTGGGCACCACCGAGGACGTTGAGGAGTAG
PROTEIN sequence
Length: 597
VKAGDILVGKITPKGETELSPEEKLLTAIFGEKAKDVKDSSLKVPPGMEGVVIDVKIFSRIEDQVVEKDRGERIGEVRRLEVDEKARITEAMAAELVELLVGQEVGLLLKAGTVEEYLPAGTKLTRPQLAEVRFADVDLKTLRVANKAVNEKIKAMLDAATGERAKIEEKSEDQIDKILQPDELPPGVIQLVKVYVAEKRKISVGDKMAGRHGNKGIIARIVPEEDMPFLPDGTPVDIVLNPLGVPSRMNVGQILETHLGWAARILGFEAKTPVFQGADETEIGILVRLAGLTWAAEALRLAVRPPEMDPETVRGITQDLRRLPATNGGKPDLTRAGISLLASRALGTETREVFHRFEDFLKFAAKELADRELEQRRLEQETHAARLEAEDLAKADKAALKAGLKEVEKFLEHGKPAEVLEAVGYPALAAVLGPKSEADLDQAVSELLAIAGLSPAGKCRLRDGRSGEFFTSDVTVGSIYMMKLSHLVDDKIHARSIGPYSLVTQQPLAGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVNGRSRVYEAIVKGQNLPKPGIPESFNVLVKELQALGLKVTLGTTEDVEE*