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13_1_40cm_4_scaffold_1010

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1010_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..538)
DNA (537bp) protein (179aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3068161 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM50 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short chain dehydrogenase family protein
13_1_40cm_4_scaffold_1010_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

686..2419
DNA (1734bp) protein (578aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=3431010 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSLF43 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1010_3
unknown

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comp(2314..3102)
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_4_scaffold_1010_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3195..4106)
DNA (912bp) protein (304aa)
hypothetical protein; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acetylmuramic acid 6-phosphate etherase id=3431007 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
murQ; N-acetylmuramic acid 6-phosphate etherase
13_1_40cm_4_scaffold_1010_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4186..5364
DNA (1179bp) protein (393aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterised conserved protein UCP016719 id=4485812 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_1010_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5374..5712)
DNA (339bp) protein (113aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3877521 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1010_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5837..6412)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003764836
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_1010_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6623..8137
DNA (1515bp) protein (505aa)
beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative beta-N-acetylglucosaminidase id=4485808 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
beta-N-acetylglucosaminidase
13_1_40cm_4_scaffold_1010_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9208..10692)
DNA (1485bp) protein (495aa)
sodium solute transporter superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SSS sodium solute transporter superfamily id=4998227 bin=GWA2_Methylomirabilis_73_35 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sodium solute transporter superfamily protein
13_1_40cm_4_scaffold_1010_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10713..11333)
DNA (621bp) protein (207aa)
hypothetical protein; K07323 putative toluene tolerance protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein id=4998226 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
organic solvent tolerance ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1010_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11463..12344
DNA (882bp) protein (294aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4998225 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase BadF/BadG/BcrA/BcrD type
13_1_40cm_4_scaffold_1010_12
R_OD1_Kaiserbacteria_53_29, Kaiserbacteria, Parcubacteria, Bacteria

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12341..12619
DNA (279bp) protein (93aa)
phosphatidic acid phosphatase domain-containing protein, PAP2 family Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_29_curated
phosphoesterase PA-phosphatase-like protein
13_1_40cm_4_scaffold_1010_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12688..13008
DNA (321bp) protein (107aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4998224 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 13 items

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