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13_1_40cm_4_scaffold_1038

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1038_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2..451
DNA (450bp) protein (150aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein id=14626248 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A 1
13_1_40cm_4_scaffold_1038_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(527..1459)
DNA (933bp) protein (311aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3824567 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1038_3
unknown

Not on your lists

comp(1697..1972)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_1038_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1953..2447)
DNA (495bp) protein (165aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1038_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2537..3892)
DNA (1356bp) protein (452aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) id=4115281 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1038_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3885..8456)
DNA (4572bp) protein (1524aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=GWA2_Rokubacteria_73_35_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain (NADPH-GOGAT) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM42_9BACT
13_1_40cm_4_scaffold_1038_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8573..9499
DNA (927bp) protein (309aa)
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
LysR substrate-binding protein id=4115284 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
13_1_40cm_4_scaffold_1038_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9510..10640
DNA (1131bp) protein (377aa)
Xaa-Pro aminopeptidase id=14626461 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Xaa-Pro aminopeptidase Tax=CSP1_6_Rokubacteria
Xaa-Pro aminopeptidase
13_1_40cm_4_scaffold_1038_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10731..11255
DNA (525bp) protein (175aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Hypothetical conserved protein id=4115285 bin=GWA2_Methylomirabilis_73_35 species=uncultured alpha proteobacterium genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative signal-transduction protein containing cAMP-binding and CBS domains
13_1_40cm_4_scaffold_1038_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11427..13298
DNA (1872bp) protein (624aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha id=4115286 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1038_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13295..14323
DNA (1029bp) protein (343aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta id=4115287 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate domain-containing TPP-binding protein
13_1_40cm_4_scaffold_1038_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14467..15912
DNA (1446bp) protein (482aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) Tax=GWA2_Rokubacteria_73_35_curated
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
Glycolate oxidase, subunit GlcD id=4115288 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1038_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15925..17244
DNA (1320bp) protein (440aa)
FAD linked oxidase-like protein id=4115289 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FAD linked oxidase-like protein Tax=GWA2_Rokubacteria_73_35_curated
FAD linked oxidase-like protein
13_1_40cm_4_scaffold_1038_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17244..18461
DNA (1218bp) protein (406aa)
Uncharacterized protein id=4115290 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_1038_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18469..18795
DNA (327bp) protein (109aa)
Cupin domain protein id=4143459 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
cupin 2 barrel domain-containing protein
13_1_40cm_4_scaffold_1038_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18792..19604
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4143458 bin=GWF2_Methylomirabilis_70_14 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1038_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19601..20995
DNA (1395bp) protein (465aa)
iron-sulfur cluster binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
(4Fe-4S) cluster-containing protein id=4115293 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iron-sulfur cluster binding protein
13_1_40cm_4_scaffold_1038_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20992..21729
DNA (738bp) protein (246aa)
hypothetical protein; K00782 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4115294 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1038_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21722..22123
DNA (402bp) protein (134aa)
Putative uncharacterized protein id=4115295 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_1038_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22129..22887
DNA (759bp) protein (253aa)
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 id=4115296 bin=GWA2_Methylomirabilis_73_35 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD family hydrolase
13_1_40cm_4_scaffold_1038_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22974..23909
DNA (936bp) protein (312aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Thioredoxin reductase id=4115297 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioredoxin reductase
13_1_40cm_4_scaffold_1038_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23941..24750)
DNA (810bp) protein (270aa)
putative L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative L-aspartate dehydrogenase (EC:1.4.1.21)
Probable L-aspartate dehydrogenase id=4115298 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1038_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25188..25832
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4115299 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1038_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25825..27213
DNA (1389bp) protein (463aa)
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Conserved uncharacterized protein id=4115300 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative DNA recombination protein RmuC
13_1_40cm_4_scaffold_1038_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

27210..28964
DNA (1755bp) protein (585aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glr3452 protein id=4115301 bin=GWA2_Methylomirabilis_73_35 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1038_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

28993..29295
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4115302 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1038_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

29305..31680
DNA (2376bp) protein (792aa)
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4961237 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dioxygenase
13_1_40cm_4_scaffold_1038_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

31680..32135
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=4961238 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K09986 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_1038_29
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

32150..32464
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=2164662 bin=GWB2_Chloroflexi_54_36 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
13_1_40cm_4_scaffold_1038_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

32667..32801
DNA (135bp) protein (45aa)
hypothetical protein id=14627837 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
Displaying items 1-30 of 62 in total

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