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13_1_40cm_4_scaffold_11842

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11842_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..1135
DNA (1134bp) protein (378aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_16_Gemmatimonadetes_66_8_curated
dnaK; chaperone protein DnaK
13_1_40cm_4_scaffold_11842_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1176..2747
DNA (1572bp) protein (524aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
putative S1 family peptidase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PDZ/DHR/GLGF domain protein
13_1_40cm_4_scaffold_11842_3
unknown

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comp(2752..3384)
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_40cm_4_scaffold_11842_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3473..3976
DNA (504bp) protein (168aa)
hypothetical protein
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_11842_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4029..4421)
DNA (393bp) protein (131aa)
ctaG; putative CtaG protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ctaG; putative CtaG protein
Putative CtaG protein id=4743809 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_11842_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4839..5159)
DNA (321bp) protein (107aa)
hypothetical protein id=24489208 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_11842_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5183..5752)
DNA (570bp) protein (190aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1); K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1)
Cytochrome c oxidase subunit III id=4393248 bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_11842_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5752..7542)
DNA (1791bp) protein (597aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=24489206 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RBG_16_RIF_WS3X_71_46_curated
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1)
13_1_40cm_4_scaffold_11842_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7539..8537)
DNA (999bp) protein (333aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=24489205 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cytochrome c oxidase subunit II (EC:1.9.3.1)
13_1_40cm_4_scaffold_11842_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8550..9332)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Y7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89180.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 10 items

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