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13_1_40cm_4_scaffold_1285

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1285_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..472)
DNA (471bp) protein (157aa)
pafA; proteasome accessory factor PafA (EC:6.3.2.-) Tax=GWA2_Rokubacteria_73_35_curated
Pup--protein ligase id=2625926 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1285_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(479..1303)
DNA (825bp) protein (275aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4420283 bin=GWF2_Lentisphaerae_50_93 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
13_1_40cm_4_scaffold_1285_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1471..3117)
DNA (1647bp) protein (549aa)
Putative uncharacterized protein id=2476236 bin=GWA2_Methylomirabilis_73_35 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
dynamin family protein
13_1_40cm_4_scaffold_1285_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3213..4400)
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U7Z8_9CYAN
Major Facilitator Superfamily Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_1285_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4623..5240
DNA (618bp) protein (206aa)
Putative phosphate transport regulator id=2317445 bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transport regulator; K07220 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
phosphate transport regulator
13_1_40cm_4_scaffold_1285_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5270..5485
DNA (216bp) protein (72aa)
Kef-type K+ transport system, membrane component n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TY49_9EURY
sodium/hydrogen exchanger Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sodium/hydrogen exchanger
13_1_40cm_4_scaffold_1285_7
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(5394..5777)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AC31_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA44151.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
13_1_40cm_4_scaffold_1285_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5802..6455
DNA (654bp) protein (218aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=2413345 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1285_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6452..7486
DNA (1035bp) protein (345aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1285_10
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

Not on your lists

7598..7840
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036A319E
Uncharacterized protein {ECO:0000313|EMBL:KFX86725.1}; TaxID=1437433 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseu
hypothetical protein
13_1_40cm_4_scaffold_1285_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7927..8322
DNA (396bp) protein (132aa)
putative ring-cleavage extradiol dioxygenase id=14627127 bin=bin7_NC10_sister species=Haloterrigena thermotolerans genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
putative ring-cleavage extradiol dioxygenase Tax=CSP1_6_Rokubacteria
glyoxalase
13_1_40cm_4_scaffold_1285_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8440..8883
DNA (444bp) protein (148aa)
Tripartite tricarboxylate transporter TctB family id=2413341 bin=GWA2_Methylomirabilis_73_35 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tripartite tricarboxylate transporter TctB family Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_1285_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9363..10394
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627123 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
transporter
13_1_40cm_4_scaffold_1285_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10391..11371
DNA (981bp) protein (327aa)
Protein bugT-like protein id=2413339 bin=GWA2_Methylomirabilis_73_35 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein bugT Tax=GWA2_Rokubacteria_73_35_curated
protein bugT
13_1_40cm_4_scaffold_1285_15
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11563..12339)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LPN1_DINSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV92354.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacte
13_1_40cm_4_scaffold_1285_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12512..13060
DNA (549bp) protein (183aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
Peptide deformylase id=2413338 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1285_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13065..13511
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2413287 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1285_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13508..14167
DNA (660bp) protein (220aa)
hypothetical protein id=14627119 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_1285_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14167..14991
DNA (825bp) protein (275aa)
Putative uncharacterized protein id=2413285 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_1285_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14993..16273
DNA (1281bp) protein (427aa)
peptidase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase M48, Ste24p id=2413284 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M48, Ste24p
13_1_40cm_4_scaffold_1285_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16320..17057
DNA (738bp) protein (246aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627117 bin=bin7_NC10_sister species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1285_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17260..17457
DNA (198bp) protein (66aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14626506 bin=bin7_NC10_sister species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_1285_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

17682..18293
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K5_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40148.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_1285_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18230..18637)
DNA (408bp) protein (136aa)
mutT; mutator protein MutT (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mutT; mutator protein MutT (EC:3.6.1.-)
Mutator MutT protein id=4996876 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1285_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18624..19304)
DNA (681bp) protein (227aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
A/G-specific adenine glycosylase id=3970265 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1285_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19341..20411
DNA (1071bp) protein (357aa)
glycine cleavage system t protein (EC:2.1.2.10); K06980 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycine cleavage system t protein (EC:2.1.2.10); K06980 id=14627031 bin=bin7_NC10_sister species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gcvT; glycine cleavage system T protein (EC:2.1.2.10)
13_1_40cm_4_scaffold_1285_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20425..20862
DNA (438bp) protein (146aa)
hypothetical protein; K06888 Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1285_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20835..21656
DNA (822bp) protein (274aa)
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1285_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21662..22360
DNA (699bp) protein (233aa)
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1285_30
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(22468..22617)
DNA (150bp) protein (50aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037699B8
ExsB protein; K06920 queuosine biosynthesis protein QueC Tax=GWB2_Nitrospirae_47_37_curated
exsB protein
Displaying items 1-30 of 75 in total

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