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13_1_40cm_4_scaffold_1340

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1340_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1..402
DNA (402bp) protein (134aa)
peptidase M28 id=14626954 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
peptidase M28 Tax=CSP1_6_Rokubacteria
peptidase M28
13_1_40cm_4_scaffold_1340_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

402..1508
DNA (1107bp) protein (369aa)
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
periplasmic component of the Tol biopolymer transport system id=14626953 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
periplasmic component of the Tol biopolymer transport system
13_1_40cm_4_scaffold_1340_3
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1604..2062
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:EEA03296.1}; Flags: Precursor;; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source=
13_1_40cm_4_scaffold_1340_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2202..3743)
DNA (1542bp) protein (514aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1340_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3778..4680)
DNA (903bp) protein (301aa)
Putative peptide ABC transporter permease protein n=1 Tax=uncultured marine bacterium MedDCM-OCT-S11-C95 RepID=D6PE72_9BACT
Diguanylate cyclase {ECO:0000313|EMBL:ETX08944.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
glutathione transport system permease GsiD
13_1_40cm_4_scaffold_1340_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..5776)
DNA (957bp) protein (319aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08943.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein id=14431362 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
dipeptide transport system permease DppB
13_1_40cm_4_scaffold_1340_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5784..7403)
DNA (1620bp) protein (540aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter substrate-binding protein id=14431361 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1340_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7430..7558)
DNA (129bp) protein (43aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_1340_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7558..7911)
DNA (354bp) protein (118aa)
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_1340_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8237..8671
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=1904680 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. WH 5701 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_1340_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8995..9129
DNA (135bp) protein (45aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
RES domain protein id=1904677 bin=GWA2_Methylomirabilis_73_35 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1340_12
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(9150..9854)
DNA (705bp) protein (235aa)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C (EC:1.3.3.11)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C {ECO:0000313|EMBL:CCW35737.1}; EC=1.3.3.11 {ECO:0000313|EMBL:CCW35737.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonad
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZE9_9BACT
13_1_40cm_4_scaffold_1340_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10004..11605
DNA (1602bp) protein (534aa)
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein id=14625072 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 5 extracellular solute-binding protein (EC:3.1.3.26)
13_1_40cm_4_scaffold_1340_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11801..12787
DNA (987bp) protein (329aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein id=14625071 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
13_1_40cm_4_scaffold_1340_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

12804..13631
DNA (828bp) protein (276aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein id=14625070 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
13_1_40cm_4_scaffold_1340_16
unknown

Not on your lists

13800..14012
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_1340_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14034..14927)
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1340_18
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14959..18219)
DNA (3261bp) protein (1087aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNC0_AZOSU
Uncharacterized protein {ECO:0000313|EMBL:KAK45295.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jian
hypothetical protein
13_1_40cm_4_scaffold_1340_19
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(18219..18914)
DNA (696bp) protein (232aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2KEI2_9RHIZ
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
13_1_40cm_4_scaffold_1340_20
unknown

Not on your lists

19043..19174
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_1340_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19774..20610)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B24DF
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_1340_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20607..21524)
DNA (918bp) protein (306aa)
appB; ABC-type transporter, permease component: PepT family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Dipeptide transport system permease DppB id=4948701 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
h16_A2950; ABC transporter permease
13_1_40cm_4_scaffold_1340_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21625..21870)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_1340_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21957..23822
DNA (1866bp) protein (622aa)
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS51_9BURK
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EHR72848.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium
13_1_40cm_4_scaffold_1340_25
unknown

Not on your lists

24513..24692
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_1340_26
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24689..25384
DNA (696bp) protein (232aa)
immunogenic protein precursor n=1 Tax=Bradyrhizobium japonicum RepID=UPI000375C4A1
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EHR01261.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bra
immunogenic protein precursor
13_1_40cm_4_scaffold_1340_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25384..25656
DNA (273bp) protein (91aa)
Immunogenic protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZDQ8_9BRAD
immunogenic protein precursor Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
immunogenic protein
13_1_40cm_4_scaffold_1340_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25668..26669
DNA (1002bp) protein (334aa)
Aldo/keto reductase id=4911286 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative aldoketoreductase
13_1_40cm_4_scaffold_1340_29
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(26702..27064)
DNA (363bp) protein (121aa)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036892EA
3-oxoacyl-ACP reductase Tax=RBG_16_NC10_65_8_curated
3-oxoacyl-ACP reductase
13_1_40cm_4_scaffold_1340_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27083..28177)
DNA (1095bp) protein (365aa)
id=4695023 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4695023 Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 38 in total

View Taxonomy